Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_4073 |
Symbol | cmk |
ID | 3712318 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4601394 |
End bp | 4602083 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | cytidylate kinase |
Protein accession | YP_349801 |
Protein GI | 77460294 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000293328 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.11895 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACAACA TTGCACCGGT CATCACCATC GACGGGCCAA GCGGCTCGGG CAAAGGCACC GTAGCCGGGA TTCTGGCCAA GCGTCTTGGC TGGAACCTGC TGGACTCCGG TGCGTTGTAT CGCCTGCTGG CGTTCGCGGC GCACAACCAT GGTGTCGACC TGACCAATGA AGAGTTGCTG AAGAAACTGG CCGCTCATCT GGATGTGCAG TTCATCGCGG CGACCGACGG TCAGTTGCAA CGCATCATTC TGGAAGGTGA CGAAGTCAGC GATGTCATCC GCACTGAAAG CGTCGGTTCC GGCGCTTCTC AGGTGGCGGC ATTGCCGGCT GTACGCGAAG CGCTGTTGCA GCGCCAGCGT GCTTTTCAGG AAGCCCCTGG CCTGGTGGCC GATGGTCGCG ACATGGGTAC GGTAGTATTT CCGAATGCCC CCCTGAAGAT TTTCCTGACC GCCAGTGCCG AGGAGAGGGC GCGCCGTCGA TATTTGCAGT TGAAGGGCAA AGTCGAGGGT GTTAGTCTGT CGAGTCTGCT AGATGAGATC CGTGCGCGCG ACGAGCGTGA TACCCAGCGA GCGGTGGCCC CGCTCAAGCC GGCGGCTGAC GCCATACAGC TGGATTCCAC GGAGTTGTCC ATCGATCAGG TGCTTGAACG CATCATGAGC GAGATCGCCA TTCGCGATAT CGCCGGGTGA
|
Protein sequence | MNNIAPVITI DGPSGSGKGT VAGILAKRLG WNLLDSGALY RLLAFAAHNH GVDLTNEELL KKLAAHLDVQ FIAATDGQLQ RIILEGDEVS DVIRTESVGS GASQVAALPA VREALLQRQR AFQEAPGLVA DGRDMGTVVF PNAPLKIFLT ASAEERARRR YLQLKGKVEG VSLSSLLDEI RARDERDTQR AVAPLKPAAD AIQLDSTELS IDQVLERIMS EIAIRDIAG
|
| |