| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4051 |
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| Symbol | |
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| ID | 3713902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 4575106 |
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| End bp | 4577100 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_349779 |
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| Protein GI | 77460272 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.8742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.411044 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAAAA TGCGAGCATT TCTGCTGGGT TTGCCGCGTC GTCAAAAACG ACTGCTGCAG
GTGGCCACCG ACGTCGTTCT CGTCTGGGGG GCGCTGTGGC TGGCATTCAT CGTTCGCCTC
GGAATCGATG ATATGTACAA CCCCATCAAA GTGCATGCCT GGCTATTCGT CTGTGCCCCG
CTTGTTGCAA TACCGCTGTT TATTCGATTT GGCATGTATC GCGCGGTCAT GCGCTACTTC
GGCAATGATG CACTAATTGC CATCATCAAG GCGGTCAGCC TTTCTTCACT GATACTCGCA
GTAGTTGTCT ACTGGTACAG CAATCATGAA AGTGTTGTCC CCAGATCCAT CATTTTCAAC
TACTGGTGGC TGAGTCTGGT GATCATTGGC GGATTGCGCC TGTGCATGCG TCAGTATTTC
ATGGGTGACT GGTTCACCGC AGCCCAGCAC GTACCGTTCA CCAGTCGCGA CGATGGCCTG
ACCAAGGTGG CGATCTATGG TGCCGGAGTC GCCGGTAATC AGTTGGTCGC GGCTCTGCGA
ATGGGGCGAG TCATGCGCCC GGTGGCGTTC ATCGATGATG ATGCGAGTAT CGCTGATCGG
GCCATTTCGG GTCTGCAGGT CTATAAGCCC AAGCACATTC AGCAAATGAT CGACGTGACG
GGAGCGCAGG AAATTCTCCT GGCGCTGCCT TCATCCACTC GTGCCCGTCG CCGGGAAATC
CTCAATTTGC TGGAAGGATT CCCACTGCAT ATTCGCAGTG TTCCAAGTTT TACCGACCTG
GCCAGCGGCC GGGTGAAGGT CGATGACATT CAGGAAGTCG ACATCGCGGA CCTGCTGGGG
CGCGACTCGG TGCCGGCCCA ATCCGATCTG CTGGCTCACT GCATTACCGG CAAAGTGGTG
ATGGTGACAG GCGCGGGCGG GTCGATCGGT TCGGAGCTCT GCCGGCAAAT CTTTCTGCTT
GGGCCGATAA CGCTTCTGCT GTTCGATCAC AGTGAGTTCA ATCTATACAG CATTCTGTCC
GAGCTCGAAC AGCGCATCGC GCGCGAGTCT GTCTCCATTC GTCTACTGCC GATTCTCGGT
TCCATCCGGC ATCCTCACAA GCTCCTGGAT GTCATGAAGA CGTGGGGCGT GGACACTGTC
TATCACGCGG CCGCCTATAA ACATGTGCCC ATGGTTGAAC ACAATATTGC CGAAGGTGTG
CTGAATAACG TGATCGGCAC CCTCAATACG GCGCAGGCAG CACTGCAGGC AGGTGTTTCC
AACTTTGTTC TGATTTCCAC CGACAAGGCT GTGCGCCCCA CCAATATCAT GGGCAGCACC
AAGCGACTTG CCGAGCTGAC CCTGCAGGCG CTGAGTCGTG AGCTGGCCCC TGTACTGTTC
GGCGACAAGG CCAATGTGTC TCGCGTCAAC AAGACGCGAT TCACCATGGT GCGTTTCGGA
AATGTGCTGG GTTCGTCGGG GTCGGTGATT CCGCTGTTCC ATAGCCAGAT CAAATCCGGC
GGTCCGCTGA CGGTCACTCA TCCCAAGATC ACCCGCTATT TCATGACGAT CCCGGAAGCC
GCGCAGTTGG TGATCCAGGC CGGCTCCATG GGGCAGGGGG GAGATGTCTT TGTGCTGGAC
ATGGGAGAGC CGGTCAAAAT TGTCGAGCTC GCTGAAAAGA TGATTCACCT GTCCGGCCTC
AGTGTGCGTT CGGAAAAGAA TGTGCACGGC GATATTGCAA TCGAATTCAC CGGGTTGCGG
CCAGGGGAGA AGCTCTATGA AGAACTCCTG ATCGGTGACA ATGTTTCGGC GACGCCTCAC
CCCATGATCA TGAGTGCCAA CGAGGACCTC ATTCCCTGGG ACGTGCTCAA GGTTCGGCTG
TCGGAATTGC TGGCTGCAGT CGAAAAGGAC GACTACTCCC GCGTTCGGCA GATTTTGCGC
GAAACCGTCA GTGGCTATGC GCCTGATGGA GAAATTGTCG ACTGGATCTA TCAGCAGCGT
CGCCTCGACC CTTGA
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| Protein sequence | MDKMRAFLLG LPRRQKRLLQ VATDVVLVWG ALWLAFIVRL GIDDMYNPIK VHAWLFVCAP
LVAIPLFIRF GMYRAVMRYF GNDALIAIIK AVSLSSLILA VVVYWYSNHE SVVPRSIIFN
YWWLSLVIIG GLRLCMRQYF MGDWFTAAQH VPFTSRDDGL TKVAIYGAGV AGNQLVAALR
MGRVMRPVAF IDDDASIADR AISGLQVYKP KHIQQMIDVT GAQEILLALP SSTRARRREI
LNLLEGFPLH IRSVPSFTDL ASGRVKVDDI QEVDIADLLG RDSVPAQSDL LAHCITGKVV
MVTGAGGSIG SELCRQIFLL GPITLLLFDH SEFNLYSILS ELEQRIARES VSIRLLPILG
SIRHPHKLLD VMKTWGVDTV YHAAAYKHVP MVEHNIAEGV LNNVIGTLNT AQAALQAGVS
NFVLISTDKA VRPTNIMGST KRLAELTLQA LSRELAPVLF GDKANVSRVN KTRFTMVRFG
NVLGSSGSVI PLFHSQIKSG GPLTVTHPKI TRYFMTIPEA AQLVIQAGSM GQGGDVFVLD
MGEPVKIVEL AEKMIHLSGL SVRSEKNVHG DIAIEFTGLR PGEKLYEELL IGDNVSATPH
PMIMSANEDL IPWDVLKVRL SELLAAVEKD DYSRVRQILR ETVSGYAPDG EIVDWIYQQR
RLDP
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