Gene Pfl01_4042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_4042 
Symbol 
ID3713893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4567333 
End bp4568409 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content56% 
IMG OID 
Productglycosyl transferase family protein 
Protein accessionYP_349770 
Protein GI77460263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.625584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.900283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCC CTACAGTTTC CGTGATCATG GCGACCTATA ATCACGCCCC TTTTGTGGCC 
GAGGCGATCC AGAGTGTCCT TGGGCAGACC GGTGTGGATT TCGAGTTCCT CATCTCTGAT
GACGGCTCGG CCGACAACAC GCGGGACGTG GTTGCGTCCA TCAAGGACGA GCGGATCAGG
TTCTATCCCA ATGAAGTCAA CCGCGGCGCC GGTGTCGTCA CCAATGAACT GATCCAGCGT
GCATCGGGCG AGTTCATCGC ACTGCTCAAC TCGGACGATT ACTGGTGCGA CAGCGACAAG
CTGGCTGTCC AGGTTCAGTT CCTTCGGGAT AACCCACAGG TAGGCGCCTG CTTTGGCCGG
GCTCGTTTTG TCGATAAGGA CGGCCGCCCA ATGGACAAGG CGAGCATTCC GTCCGGCGAT
GTATTCGACC AGCCGAACCG CTCTCAGGGT GAATGGCTGC GGCGGTTCTT CGAGCTGGGC
AACTGCATCT GTCATCCGAC CATGCTCATC CGCAAAGCGT GCTACGACGA GTTGGGCATG
TACAGCAACA GGATGCGCCA GCTCCCCGAT CTGGATATGT GGATACGTCT GCTCAAGCAT
TACCAGATCC ATATTTTCGA CAAGGAAATG ATTACGTTCC GTTTAATGCC GGGTGAAAAC
GCCAGCAGCC AGACCGTGAC CAACTCGATC CGGACCATCA ACGAACATTA CCTGATTGCC
GAGAATTTCT TTGAGGGTGT GACGGCCGAG CAGTTGACTG ACGGGTTCTC GGATCTGTTG
CGCATCAAGC CCATCGCGTC CGACATCCAC CTTGATATCG AAAAGGCACT TCTATACCTG
GCTCACAATC AGTGGCTCGG AAAGCCTTAC CAGATGATCG GAATCCTGAA ACTCAATGCA
CTGCTGAACA GTCCTGAGCA CCACAAGGTC ATGGTCGAGC AATACGGGAT GGATGACCGC
TGGTACCAGA AGGAGCTGGG GGAAATCGAT GTGCTGCGGC CCCGGGTCGT GGCGGTCATG
AGTCAGCAGA AATCCCGGGC GAGACATTTT CTGCAGCGTT TTTTTCCCAA GGGATAA
 
Protein sequence
MSSPTVSVIM ATYNHAPFVA EAIQSVLGQT GVDFEFLISD DGSADNTRDV VASIKDERIR 
FYPNEVNRGA GVVTNELIQR ASGEFIALLN SDDYWCDSDK LAVQVQFLRD NPQVGACFGR
ARFVDKDGRP MDKASIPSGD VFDQPNRSQG EWLRRFFELG NCICHPTMLI RKACYDELGM
YSNRMRQLPD LDMWIRLLKH YQIHIFDKEM ITFRLMPGEN ASSQTVTNSI RTINEHYLIA
ENFFEGVTAE QLTDGFSDLL RIKPIASDIH LDIEKALLYL AHNQWLGKPY QMIGILKLNA
LLNSPEHHKV MVEQYGMDDR WYQKELGEID VLRPRVVAVM SQQKSRARHF LQRFFPKG