| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4012 |
|---|
| Symbol | |
|---|
| ID | 3713980 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4537326 |
|---|
| End bp | 4538297 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | ErfK/YbiS/YcfS/YnhG |
|---|
| Protein accession | YP_349740 |
|---|
| Protein GI | 77460233 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000000167491 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.572357 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCCGC GTTTTCCTGC CGTCACCCGC TGCCTGTCTC TTGCCGCCCT GTGTGTGGCC
GGTCCCGTTG CCGCACTGGA GTTTCCACTG CCACCGCCTG GTGAAGACAT CATCGGCCAG
GTGCAGGTGA TCAAGGCCAA GTACGAAGAC ACCTTTGCCG ATCTGGGCAC CACCTACGAT
CTGGGTTATT CGGAAATGGT CGCGGCCAAC CCGGGCGTCG ATGCCTGGTT GCCGGGCGCC
GGCACCGAAG TGGTCCTGCC GACCCGTTTC ATCCTGCCGC CGGGGCCGCG TGAAGGCATC
GTGATCAACC TGGCCGAGTA CCGCCTCTAT TACTACCCGA AAGGCCGGAA CGTGGTGTAC
ACCTTCCCGC TGGGTATCGG CCGTGAAGGC TGGGGCTCGC CGATCGCTCA CACCACGATT
ACCGCGAAGA CGCCGAACCC GACCTGGACG CCGCCAGCTT CGATCAAGGC TGAACATGCT
GCCGATGGCG ATCCGCTGCC GAACGTGGTG CCGGCCGGTC CGGACAACCC GCTGGGGCCG
TTCAAGTTCA CCCTGGGCAC GCCGGGCTAC CTGATCCACG GCTCGAACAA GAAGTTCGGT
ATCGGCATGC GCACCAGTCA CGGCTGCTTC CGCATGTTCA ACAACAACGT GCTGGAAATG
GCCAGCATGG TTCCGGTGGG GACTTCGGTA CGGATTCTCA ACGACGCCTA CAAGTTCGGT
CGCAGTGGCG GCAAGATCTA TCTGGAGGCG CACACGCCGA TCGATGACAA AGGCAACCCG
TCGGTGGTCG ACAAGCACAC CGCCGTGATC AACGCGATGC TCAAGCGCGA AGACATCACC
AACAACCTTC GCATGAACTG GGATGTGGTG CGTGATGTGG TGGCGGCCGA AGATGGCCTG
CCAACCGAAA TCGGCACACC GAACACCTCG GCGCCGATGG TCTCCAGCGC ACCGATCGAC
CTGCAGCAAT AA
|
|---|
| Protein sequence | MLPRFPAVTR CLSLAALCVA GPVAALEFPL PPPGEDIIGQ VQVIKAKYED TFADLGTTYD
LGYSEMVAAN PGVDAWLPGA GTEVVLPTRF ILPPGPREGI VINLAEYRLY YYPKGRNVVY
TFPLGIGREG WGSPIAHTTI TAKTPNPTWT PPASIKAEHA ADGDPLPNVV PAGPDNPLGP
FKFTLGTPGY LIHGSNKKFG IGMRTSHGCF RMFNNNVLEM ASMVPVGTSV RILNDAYKFG
RSGGKIYLEA HTPIDDKGNP SVVDKHTAVI NAMLKREDIT NNLRMNWDVV RDVVAAEDGL
PTEIGTPNTS APMVSSAPID LQQ
|
|---|
| |