| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_4000 |
|---|
| Symbol | |
|---|
| ID | 3713968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4528188 |
|---|
| End bp | 4529330 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_349728 |
|---|
| Protein GI | 77460221 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000276231 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.48129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCAAC TGAACACCCG CTGGGACATT TTTTGTACGG TCGTCGACAA CTACGGCGAC
ATCGGCGTGA CCTGGCGTCT GGCCCGACAA CTGGTAAGCG AGCACGCAGT GGCGGTGCGA
CTGTGGGTCG ATGATCTGCG CGCTTTCGAA CGCATTTGTC CCGAAATCGA CATCGGCCTC
GATCAGCAAT GGCAGCAGGG CGTCGAAGTC CGGCACTGGC CAGCCGAGTG GCAGGAGGCC
GATGCGGCCG ACGTGGTGAT CGCTGCGTTT GCCTGCCAGT TGCCAAGCGT CTACATGGAC
GCCATGGCCG CAAGGGAAGA ACCGCCGTTG TGGATGAACC TCGACTACCT CAGTGCCGAA
GACTGGGTGG TCGGGTGTCA CGGACTGCCG TCGGTGAAGT ACAAGTCGGT GCAGAAGTAC
TTTTTCTTTC CGGGATTTCA GCCTGGAACT GGCGGCTTGT TGCGTGAAAG GGGTTTGCTG
GAGCGGCGTC AGCAGTTTCA GCAGGATCCC AAGGTGCAGC GACAATTCTT GCACGGTCTG
GGGATCGTTC CTGCTCCCGA TGCGCAACTG ATCTCGCTGT TTGCCTACGA GAATGCCGGA
CTCGCCAGCT GGCTTGATGT GCTCGCGGCT GACTCGACGC CCACTCATCT GCTGGTGCCG
GAAGGGCGGA TTCTCGGTGA TGTCGCCCGT TGGCTCGGGG TCGAGTCGCT GGCGGTCGGG
GCGACGCATG TTCGTCAGTC GCTGACCGTG CAGGTGCTGC CGTTCGTCCG TCAGGATCAA
TACGATCAAT TGCTCTGGTG CTGCGATTTC AACGCGGTGC GCGGCGAGGA TTCGTTTGTC
CGGGCGCAGT GGGCTGGCCG TCCCATGTTG TGGCACATCT ATCAGCAGGA CGAAGACATC
CATCTGGACA AGCTCGACGC CTTCCTTGCG CTCTACACAA AACGCCTTTC GCCCGCTGCC
GCCGAGGCGA TGAACGGTCT CTGGCGTGCC TGGAGTGCCG GGCAGCCTAT CGGCGACCAC
TGGCTCGAGG CCCGCAAACA CTGGCCCGAA CTGCAGGAAA ATGCCCGCGC GTGGTGTCTG
GAACAGGCCT TGCAGGCGGA TCTTGCGACG GCGCTGGTAC AGTTTTACCG AAATTGGATA
TGA
|
|---|
| Protein sequence | MPQLNTRWDI FCTVVDNYGD IGVTWRLARQ LVSEHAVAVR LWVDDLRAFE RICPEIDIGL
DQQWQQGVEV RHWPAEWQEA DAADVVIAAF ACQLPSVYMD AMAAREEPPL WMNLDYLSAE
DWVVGCHGLP SVKYKSVQKY FFFPGFQPGT GGLLRERGLL ERRQQFQQDP KVQRQFLHGL
GIVPAPDAQL ISLFAYENAG LASWLDVLAA DSTPTHLLVP EGRILGDVAR WLGVESLAVG
ATHVRQSLTV QVLPFVRQDQ YDQLLWCCDF NAVRGEDSFV RAQWAGRPML WHIYQQDEDI
HLDKLDAFLA LYTKRLSPAA AEAMNGLWRA WSAGQPIGDH WLEARKHWPE LQENARAWCL
EQALQADLAT ALVQFYRNWI
|
|---|
| |