Gene Pfl01_3983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3983 
Symbol 
ID3714009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4511731 
End bp4512942 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content61% 
IMG OID 
Productaminotransferase AlaT 
Protein accessionYP_349711 
Protein GI77460204 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCA GCAAATCGAA CAAGCTCGCC AACGTCTGCT ACGACATTCG CGGCCCGGTG 
CTCAAGCACG CCAAACGCCT GGAAGAGGAA GGCCATCGCA TCCTCAAGCT GAACATCGGC
AACCCGGCAC CCTTTGGTTT CGAAGCGCCA GACGAAATTC TCCAGGATGT GATCCGCAAC
CTGCCGACCG CCCAGGGCTA CAGCGATTCC AAAGGCCTGT TCAGCGCGCG CAAGGCGGTG
ATGCAGTACT ACCAGCAGAA GCAGGTCGAA GGTGTCGGCA TCGAAGACAT CTATCTGGGC
AACGGCGTGT CCGAGCTGAT CGTGATGTCG CTGCAGGCAC TGCTCAACAA CGGTGACGAA
GTGCTGGTGC CGGCGCCAGA CTACCCGCTG TGGACCGCAG CCGTGAGCCT GGCCGGCGGT
AACGCTGTGC ATTACCTGTG CGACGAGGGC GCCGACTGGT TCCCGGACCT GGCCGACATC
AAGGCCAAGA TCACCCCGAA CACCAAGGCG ATGGTGATCA TCAACCCGAA CAACCCGACC
GGCGCGGTGT ATTCGAAGGA AGTGCTGTTG GGCATGCTCG AACTGGCTCG CCAGCACAAT
CTGGTGGTGT TCTCCGACGA AATCTACGAC AAGATTCTTT ACGACGACGC CGTGCACATC
TGCACCGCTT CGCTGGCCCC GGACCTGCTG TGCCTGACCT TCAACGGCCT GTCCAAGTCG
TATCGCGTGG CGGGTTTCCG TTCCGGCTGG ATCGCCATTT CCGGGCCGAA ACACAACGCT
CACAGCTACA TCGAAGGCAT CGACATGCTG GCCAACATGC GCCTGTGCGC CAACGTGCCG
AGTCAGCATG CGATCCAGAC CGCCCTGGGT GGCTATCAGA GCATCAACGA TCTGGTACTG
CCGCAAGGTC GCCTGCTGGA ACAGCGCAAC CGCACCTGGG AGCTGCTCAA CGACATTCCC
GGCGTTAGCT GCGTGAAGCC GATGGGCGCA CTGTACGCGT TCCCGAAGAT CGACCCGAAA
GTCTGCCCGA TCCACAACGA CGAGAAATTC GTGCTCGACC TGCTGCTCTC CGAGAAGCTG
CTGGTGGTGC AGGGCACGGC GTTCAACTGG CCGTGGCCTG ACCACTTCCG CGTGGTCACC
CTGCCGCGGG TCGATGACCT GGACATGGCC ATCGGTCGCA TCGGCAACTT CCTCAAGTCC
TACCGCCAGT AA
 
Protein sequence
MQFSKSNKLA NVCYDIRGPV LKHAKRLEEE GHRILKLNIG NPAPFGFEAP DEILQDVIRN 
LPTAQGYSDS KGLFSARKAV MQYYQQKQVE GVGIEDIYLG NGVSELIVMS LQALLNNGDE
VLVPAPDYPL WTAAVSLAGG NAVHYLCDEG ADWFPDLADI KAKITPNTKA MVIINPNNPT
GAVYSKEVLL GMLELARQHN LVVFSDEIYD KILYDDAVHI CTASLAPDLL CLTFNGLSKS
YRVAGFRSGW IAISGPKHNA HSYIEGIDML ANMRLCANVP SQHAIQTALG GYQSINDLVL
PQGRLLEQRN RTWELLNDIP GVSCVKPMGA LYAFPKIDPK VCPIHNDEKF VLDLLLSEKL
LVVQGTAFNW PWPDHFRVVT LPRVDDLDMA IGRIGNFLKS YRQ