Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3974 |
Symbol | |
ID | 3717433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4498952 |
End bp | 4499578 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_349702 |
Protein GI | 77460195 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCCG TTTTTATTGT CGACGATCAC CCGGTCATCC GCCTTGCCGT TCGAATGCTG CTGGAACATG AAGGTTATAA AGTCGTTGGA GAAACCGATA ACGGTGTCGA TGCCATGCAG ATGGTTCGCG AATGCATGCC CGACCTGATC ATTCTCGACA TCAGCATTCC CAAGCTCGAT GGCCTGGAAG TCCTGGCCCG CTTCAACGCC ATGAGTTCGC CCTTCAAGAC GCTGGTATTG ACTGCGCAAT GCCCGACCTT GTTCGGCATT CGTTGCATGC AGTCAGGTGC ATCGGGTTAT GTCTGCAAAC AGGAAGACCT GAGCGAACTG GTCAGTGCGA TCAAGGCTGT CCTTTCCGGC TACAACTATT TTCCCAGCCA GGCCTTGAAC CCTGTTCGTC ACGATGACGT GCGTTATGCA GAACTGGAAC TCTTCAAATC CGTCAATGAC CGGGAACTTA TGGTCTTGCA ACTCTTTGCC CAGGGCCGCA CGAACAAGGA AATTGCAAAA GGCATGTTTC TCAGTAACAA AACTGTAAGC ACTTATAAAA AACGACTGAT GCAAAAACTC AAAGCCAAGT CTCTCGTAGA ACTTATCGAA ATGGCCAAAC GTAACGCACT CGTGTGA
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Protein sequence | MNSVFIVDDH PVIRLAVRML LEHEGYKVVG ETDNGVDAMQ MVRECMPDLI ILDISIPKLD GLEVLARFNA MSSPFKTLVL TAQCPTLFGI RCMQSGASGY VCKQEDLSEL VSAIKAVLSG YNYFPSQALN PVRHDDVRYA ELELFKSVND RELMVLQLFA QGRTNKEIAK GMFLSNKTVS TYKKRLMQKL KAKSLVELIE MAKRNALV
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