Gene Pfl01_3968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3968 
Symbol 
ID3717427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4493353 
End bp4494561 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content63% 
IMG OID 
ProductRh-like protein/ammonium transporter 
Protein accessionYP_349696 
Protein GI77460189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.750778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATC TGCAAAGCGC TGTGGACACG CTGGTTCACA GTTCCAACAC GTTGTTCATT 
CTGATCGGTG CGGTCATGGT GCTGGCCATG CACGCCGGGT TCGCATTTCT GGAGGTCGGA
ACGGTTCGCC AGAAAAACCA GGTCAACGCA CTGTCGAAGA TTCTCAGCGA CTTTGCGGTG
TCGACGCTGG CTTATTTCTT TATAGGCTAT TGGCTTTCGT ACGGGGTGAC CTTCCTGCAT
CCGGCGGCGG TGCTCAGTGC CGATCATGGT TATGGACTGG TGAAGTTTTT CTTCCTGCTG
ACCTTTGCGG CGGCGATCCC GGCGATCATC TCCGGCGGCA TCGCCGAGCG GGCGCGTTTT
GTGCCGCAGT TGTGCGCCAC GGCGCTGATC GTGGCGTTCA TCTACCCGTT TTTCGAAGGG
ATGATCTGGA ACGGCAACTA CGGTCTGCAA GCCTGGCTGA CCGCACAGTT CGGCGCCCCT
TTCCATGATT TTGCGGGTTC GGTGGTGGTG CATGCCATGG GCGGCTGGCT GGCGCTGGCG
GCGGTGTTGC TGCTCGGCCC GCGCACCGGA CGCTATCGCG ATGGCAAGCT GGTGGCGTTC
GCGCCGTCGA GCATTCCGTT TCTGGCCTTG GGGTCGTGGA TCCTGATCGT CGGCTGGTTT
GGCTTCAACG TGATGAGCGC GCAAACCTTG CAAGGGGTCA GCGGACTGGT GGCGGTCAAC
TCGCTGATGG CTATGGTCGG CGGCACGGTG GCGGCGTTGA TCGTCGGGCG CAACGATCCG
GGCTTCCTGC ACAACGGCCC GTTGGCCGGG CTGGTGGCGG TGTGTGCCGG TTCCGACCTG
ATGCACCCGG TCGGCGCGCT GGTGAACGGC GCGATTGCCG GCGCCCTGTT TGTCTGGTGC
TTTACGGCGG CGCAGGTCAA ATGGCGCATC GATGACGTGC TGGGTGTCTG GCCGTTGCAC
GGTCTGTGTG GCGTGTGGGG CGGCATTGCC TGCGGGATCT TCGGCTCGAC CACGTTGGGC
GGACTCGGCG GCGTCAGCCT GATCAGCCAG TTGATCGGCA CCGCCCTTGG TGTGGCGGTG
GCGCTGATCG GCGGTTTCGC CGTCTACGGT TCGATCAAGG CGCTGCATGG TCTGCGCCTG
AGCCAGGAAC AGGAGTACTA CGGCGCCGAC CTGTCGCTGC ACAAGATCGG CGCGGTGAGC
CAGGACTAG
 
Protein sequence
MENLQSAVDT LVHSSNTLFI LIGAVMVLAM HAGFAFLEVG TVRQKNQVNA LSKILSDFAV 
STLAYFFIGY WLSYGVTFLH PAAVLSADHG YGLVKFFFLL TFAAAIPAII SGGIAERARF
VPQLCATALI VAFIYPFFEG MIWNGNYGLQ AWLTAQFGAP FHDFAGSVVV HAMGGWLALA
AVLLLGPRTG RYRDGKLVAF APSSIPFLAL GSWILIVGWF GFNVMSAQTL QGVSGLVAVN
SLMAMVGGTV AALIVGRNDP GFLHNGPLAG LVAVCAGSDL MHPVGALVNG AIAGALFVWC
FTAAQVKWRI DDVLGVWPLH GLCGVWGGIA CGIFGSTTLG GLGGVSLISQ LIGTALGVAV
ALIGGFAVYG SIKALHGLRL SQEQEYYGAD LSLHKIGAVS QD