Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3968 |
Symbol | |
ID | 3717427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4493353 |
End bp | 4494561 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | Rh-like protein/ammonium transporter |
Protein accession | YP_349696 |
Protein GI | 77460189 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.750778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAATC TGCAAAGCGC TGTGGACACG CTGGTTCACA GTTCCAACAC GTTGTTCATT CTGATCGGTG CGGTCATGGT GCTGGCCATG CACGCCGGGT TCGCATTTCT GGAGGTCGGA ACGGTTCGCC AGAAAAACCA GGTCAACGCA CTGTCGAAGA TTCTCAGCGA CTTTGCGGTG TCGACGCTGG CTTATTTCTT TATAGGCTAT TGGCTTTCGT ACGGGGTGAC CTTCCTGCAT CCGGCGGCGG TGCTCAGTGC CGATCATGGT TATGGACTGG TGAAGTTTTT CTTCCTGCTG ACCTTTGCGG CGGCGATCCC GGCGATCATC TCCGGCGGCA TCGCCGAGCG GGCGCGTTTT GTGCCGCAGT TGTGCGCCAC GGCGCTGATC GTGGCGTTCA TCTACCCGTT TTTCGAAGGG ATGATCTGGA ACGGCAACTA CGGTCTGCAA GCCTGGCTGA CCGCACAGTT CGGCGCCCCT TTCCATGATT TTGCGGGTTC GGTGGTGGTG CATGCCATGG GCGGCTGGCT GGCGCTGGCG GCGGTGTTGC TGCTCGGCCC GCGCACCGGA CGCTATCGCG ATGGCAAGCT GGTGGCGTTC GCGCCGTCGA GCATTCCGTT TCTGGCCTTG GGGTCGTGGA TCCTGATCGT CGGCTGGTTT GGCTTCAACG TGATGAGCGC GCAAACCTTG CAAGGGGTCA GCGGACTGGT GGCGGTCAAC TCGCTGATGG CTATGGTCGG CGGCACGGTG GCGGCGTTGA TCGTCGGGCG CAACGATCCG GGCTTCCTGC ACAACGGCCC GTTGGCCGGG CTGGTGGCGG TGTGTGCCGG TTCCGACCTG ATGCACCCGG TCGGCGCGCT GGTGAACGGC GCGATTGCCG GCGCCCTGTT TGTCTGGTGC TTTACGGCGG CGCAGGTCAA ATGGCGCATC GATGACGTGC TGGGTGTCTG GCCGTTGCAC GGTCTGTGTG GCGTGTGGGG CGGCATTGCC TGCGGGATCT TCGGCTCGAC CACGTTGGGC GGACTCGGCG GCGTCAGCCT GATCAGCCAG TTGATCGGCA CCGCCCTTGG TGTGGCGGTG GCGCTGATCG GCGGTTTCGC CGTCTACGGT TCGATCAAGG CGCTGCATGG TCTGCGCCTG AGCCAGGAAC AGGAGTACTA CGGCGCCGAC CTGTCGCTGC ACAAGATCGG CGCGGTGAGC CAGGACTAG
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Protein sequence | MENLQSAVDT LVHSSNTLFI LIGAVMVLAM HAGFAFLEVG TVRQKNQVNA LSKILSDFAV STLAYFFIGY WLSYGVTFLH PAAVLSADHG YGLVKFFFLL TFAAAIPAII SGGIAERARF VPQLCATALI VAFIYPFFEG MIWNGNYGLQ AWLTAQFGAP FHDFAGSVVV HAMGGWLALA AVLLLGPRTG RYRDGKLVAF APSSIPFLAL GSWILIVGWF GFNVMSAQTL QGVSGLVAVN SLMAMVGGTV AALIVGRNDP GFLHNGPLAG LVAVCAGSDL MHPVGALVNG AIAGALFVWC FTAAQVKWRI DDVLGVWPLH GLCGVWGGIA CGIFGSTTLG GLGGVSLISQ LIGTALGVAV ALIGGFAVYG SIKALHGLRL SQEQEYYGAD LSLHKIGAVS QD
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