Gene Pfl01_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3956 
Symbol 
ID3717415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4483747 
End bp4484718 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content60% 
IMG OID 
Producthistidine kinase, dimerization and phosphoacceptor region 
Protein accessionYP_349684 
Protein GI77460177 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTTT TCCAGACAGA GACCGCCAGC CCTTCTGACC GGTCTGCCCG CAGCGAACAT 
CCATTGGCTC CATCCGCTAT GTACGCCAGC CTCAAGTCAA TCACCACATG GCCTCCCTCC
CGAGAAAATG CCCGCAGGTT CACACTTCTG CTGTGTACAG GCTCGGCTCT GGGCAGTCTG
TTGACCTATG GATTGTCAGC GCAGCTGCCG CTCGGCCTGC TGCTGATCAA TGTGGCGGCT
GCGGGCTGCG TCTGGACACA ACATCGCCTG TCGCGCAAAT CCATCAAGTT CCAGCCTCAG
GAACTGGCCG ACCGTTTGCT GGAAGTCCAG GAAAACGAGC GCCATCGCCT GAGCCGTGAA
CTGCATGACG ATATCGGCCA GTTGCTGACG GCCGCCAAGC TGCAAAGCGA ATGGCTCAAG
CGTCGCTTGC CCGCGGATAT GCAGGAACAC TGTTCGGTCC TTTGCGAGAC TCTCGAAGAA
ACCCTGAACA AGGTTCGCGA CGTTTCGGCC ATTCTCAACC CGCGGCAACT GACCAGCCTT
GGTCTGGAAG CGAGCTTGCG TGCGCACCTG CTCAAGGTAC TGACCAATAC TTCGGTGCAC
TGGAGCCTTG ACTGCCAGCA GCGCCTGAAC GGAATCCCCG AAGAAATGGC CGTCGCCGCC
TTTCGCATCA CTCAGGAAGC GGTGACCAAC ATCCTTCGCC ACGCGCAGGC CAAAAACCTG
TTGATCCGCG TGCAACGTTT ACCGCAGGGC CTGACCCTGC TGATCAGCGA TGATGGACTG
GGCTTTTCCC CGGCGGCGAA TCCGGGTCGC GAAGGACAGC GAGGCATGGC CGGAATGGCC
GAACGGATCG AGCAACTGGG CGGCACACTG AGCGTGACCA GCGAGCCGGG CAAAGGCACT
CAAATCGAAG CACTATTCCC CTGGGCGCCC CGTGCACTCG AGCGGGCCAG TACGAATAAG
GTTATGCGTT GA
 
Protein sequence
MTVFQTETAS PSDRSARSEH PLAPSAMYAS LKSITTWPPS RENARRFTLL LCTGSALGSL 
LTYGLSAQLP LGLLLINVAA AGCVWTQHRL SRKSIKFQPQ ELADRLLEVQ ENERHRLSRE
LHDDIGQLLT AAKLQSEWLK RRLPADMQEH CSVLCETLEE TLNKVRDVSA ILNPRQLTSL
GLEASLRAHL LKVLTNTSVH WSLDCQQRLN GIPEEMAVAA FRITQEAVTN ILRHAQAKNL
LIRVQRLPQG LTLLISDDGL GFSPAANPGR EGQRGMAGMA ERIEQLGGTL SVTSEPGKGT
QIEALFPWAP RALERASTNK VMR