Gene Pfl01_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3939 
Symbol 
ID3715243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4453413 
End bp4454225 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content63% 
IMG OID 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_349667 
Protein GI77460160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTT TCACGGTTGA CGGACAGGCG CTTCACTACA TTGATCAAGG CACGGGCCCG 
GCGGTGCTGT TGGCCGGCAG TTACCTGTGG GACCAGGCCA TGTGGGCCCC GCAAATCGCA
GCGTTGTCGG CGCACTATCG GGTGATTGCA CTGGATCTGT GGGGCCACGG CGAATCCGGT
CGCTTGCCTG AAGGCACCGC TTCGCTGGAC GACATCGCCC GTCAGGCACT GGCCTTGCTC
GATCATCTGG ACATCGACCG GGTGACCCTG GTCGGGTTGT CGGTCGGCGG CATGTGGGGC
GTGCGTCTGG CGTTGTCGGC GCCGCAGCGG CTCAACGGTC TGGTGCTGAT GGACACTTAC
GTCGGCGTCG AGCCGGAGCC GACCCGCCAG TACTATTTCT CGCTGTTCAA ACAGATCGAG
GAAAGCGGCG GGATCTCCGA GCAACTGCTG GATATCGTGG TGCCGATCTT CTTCCGTCCG
GGCATCGATC GAGCATCGGC GCTGTATCAG GACTTCCGCG CCAAACTCGC CGGCTATTCC
GCCGAACGCC TGCGCGACAG CATCGTGCCG ATGGGGCGCA TCACCTTTGG CCGTGATGAC
CTGTTGCCGC GTCTGGGGGA GCTGAACGCG GCGACCACGC TGGTGGTCTG CGGCGATCAG
GACAAACCAC GCCCGCCCTC GGAAGCACGG GAAATGGCCG AGTTGATTGG TTGCCCGTGT
GTGTTGGTGC CGGAAGCGGG GCATATCTCC AATCTGGAGA ATCCAACCTT CGTGACCGAC
ACGCTGCTGA AGTTTCTGGC TGGGCTGAAG TAA
 
Protein sequence
MPFFTVDGQA LHYIDQGTGP AVLLAGSYLW DQAMWAPQIA ALSAHYRVIA LDLWGHGESG 
RLPEGTASLD DIARQALALL DHLDIDRVTL VGLSVGGMWG VRLALSAPQR LNGLVLMDTY
VGVEPEPTRQ YYFSLFKQIE ESGGISEQLL DIVVPIFFRP GIDRASALYQ DFRAKLAGYS
AERLRDSIVP MGRITFGRDD LLPRLGELNA ATTLVVCGDQ DKPRPPSEAR EMAELIGCPC
VLVPEAGHIS NLENPTFVTD TLLKFLAGLK