Gene Pfl01_3904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3904 
Symbol 
ID3712266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4422391 
End bp4423278 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349632 
Protein GI77460125 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000544421 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACC AGCCTCGCAG CCTTGCCTCA ACCTTGTTTC CGGTTGGCCT TCTATTAATA 
GCCATGGCAT CGATTCAGTC CGGCGCCTCA CTGGCCAAAA GCATGTTCCC CATCGTTGGC
GCTCAAGGTA CTACAACACT GCGCCTCATC TTCGCCAGCG TGATCATGCT GGTATTGCTC
AAACCCTGGA GAGCGAAGCT GACGGCCAAG TCACTGCGCA CGGTGATTGT CTATGGAATG
GCGCTAGGAG GCATGAACTT CCTCTTCTAT ATGTCGTTAC GCACTGTTCC GCTCGGCATC
GCAGTTGCCC TGGAGTTCAC CGGCCCTCTC GCGGTCGCCA TCTATGCCTC GCGTCGCGCG
ATCGACTTTC TCTGGATTGC CCTTGCAGCC ATTGGGTTGC TGTTGCTTAT ACCCACAGGC
GCTACGACAT CAGGTATCGA TCTGGTCGGT GCAGGCTATG CGCTGGGAGC TGGCTTTTGC
TGGGCGCTGT ACATTCTGTT TGGCCAGAAG GCCGGCGCAG ATAACGGTGT GACCACCGCG
GCGCTTGGCG TGATGATCGC AGCCCTGTTC GTCGCCCCCA TCGGTATCGT CCACGCTGGC
AGCGCATTGC TGACTCCCGC ATTGATCCCG ATCGCTATTG GCGTGGCGAT CCTGTCCACT
GCCCTGCCTT ACACTCTGGA AATGGTCGCC CTCACCCGCA TGCCCGCCCG CACCTTCGGC
ACACTGATGA GTATTGAACC GGCCTTTGGA GCGCTGTCGG GCCTGCTATT CCTTCAGGAA
TACCTCTCTC TGTCACAATG GATGGCGATC CTGTGCATTA TTCTGGCCTC CGTCGGTGCA
ACCATGACCA TGGGCAACAC TGCCAAACCC GCCATCGCGG CGGATTGA
 
Protein sequence
MNDQPRSLAS TLFPVGLLLI AMASIQSGAS LAKSMFPIVG AQGTTTLRLI FASVIMLVLL 
KPWRAKLTAK SLRTVIVYGM ALGGMNFLFY MSLRTVPLGI AVALEFTGPL AVAIYASRRA
IDFLWIALAA IGLLLLIPTG ATTSGIDLVG AGYALGAGFC WALYILFGQK AGADNGVTTA
ALGVMIAALF VAPIGIVHAG SALLTPALIP IAIGVAILST ALPYTLEMVA LTRMPARTFG
TLMSIEPAFG ALSGLLFLQE YLSLSQWMAI LCIILASVGA TMTMGNTAKP AIAAD