| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3903 |
|---|
| Symbol | |
|---|
| ID | 3712241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4414407 |
|---|
| End bp | 4416299 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | peptidoglycan glycosyltransferase |
|---|
| Protein accession | YP_349631 |
|---|
| Protein GI | 77460124 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAC CCATCCCTAT CAAGGACCAC GAAAAAGAAA CGCGGCTGGT CAACAAACGC
CTGATCGCCT GTGCCTTGTT CGTTTTCGCC ATCAGTTGTG CCCTGGTGGT ACGCCTGTAC
ATCCTGCAAG TCGTCGAGTT CGATTACCAC TCGACCATCT CTGAAAACAA TCGCGTCCAT
GTCCTGCCGA TCCCGCCGAC ACGCGGCCTG ATTTACGATC GCAACGGCGT GTTGCTGGCC
GATAATCGTC CCAGCTACAA CCTGACCATC ACCCGCGAAC GGGCGACTGA CGTCAATCAA
GAGCTGGATG AAGTCATCAA CCTCCTGCAC CTGCCCGCCG AAGACCGCGC AGTCTTTGAC
AAAGCCATGA AGCAGTCGCG TCATCCGTTT ACACCCGTAA CGCTGTTCTA TGAGCTAACC
GAAGAACAGA TCGCCGTGCT GGCAGTTAAC GAGTTCCGTC TACCGGGCCT GGATGTCGAG
CCACAATTCG TTCGTAACTA CCCGTTGGGT GCGCACTTCG CACACTCGAT CGGTTACGTT
GGCCGTATCA ACGAAAAAGA ATCCAAAACC CTCGACTCCG TCGAATACCG TGGCACCCAA
TCCATCGGCA AGACGGGTAT CGAACGCTTC TACGAGCCAC AGCTGCACGG CCACGTCGGT
TACGAGGAGG TAGAGACCAA CGCACAAGGT CGAGTACTAC GGGTCCTGAA ACACACCGAT
CCAATACCAG GCAAAAACAT TGTCCTGAGC CTCGACGTCA AACTCCAGGA AGCCGCCGAA
GCCGCACTGG GCGACCGTCG CGGCTCGGTC GTTGCACTGG ACCCCTCTAC CGGCGAAGTG
CTGGCCATGG TCAGCAACCC GAGCTTCGAC CCCAATCTGT TCGTGACCGG TATCAGCTCC
AAGGAATATT CCGCGCTGCG CGACTCCATC GACCGTCCGC TATTCAACCG CGTGCTGCGC
GGTCTGTATG CACCCGGTTC GACGATCAAG CCGGAAGTGG CCATCGCTGG CCTCGACGCC
GGTGTCGTCA CTCCACAAAC CCGAGTCTTC GATCCGGGCT ACTACCAACT GCCGGATTTC
GACCACAAGT ATCGCAACTG GAACCACAGC GGCGACGGTT GGGTAGACAT GGATGCAGCG
ATCATGCGGT CCAACGACAC CTACTTCTAC GACCTGGCGC ACAAGCTCGG CATCGATCGC
CTTCACGACT ACATGGCGAT GTTCGGCCTT GGCGAGAAAG TCTCGCTCGA CATGTTCGAG
GAGTCACCGG GCTTGATGCC GTCCCAGGCG TGGAAGCGCG CCACCCGGCG TCAGGCCTGG
TTCCCCGGCG AAACCGTGAT CCTCGGCATA GGCCAGGGCT ATATGCAAGT CACGCCGCTG
CAACTGGCTC AAGCCACCGC ACTGATCGCC AACAAGGGCG TCTGGAACCG TCCGCACCTG
GCCAAGACCG TCGACGGTGT GGCGCCGGTG GACGAGCACC CGATGCCGAA CATCCTGCTC
AAGGATCCGC GTGACTGGGA GCAGGTCAAC CACGGCATGC AGATGGTGAT GCACGATGCC
CGCGGCATTG CTCGTGCGGC AGCGGCCGGT GCGCAATACC GCATCGCCGG CAAGAGTGGT
ACGGCGCAAG TGGTGGCGAT CAAGCAGGGT GAGCGCTACA ACCGCGAGAA AACCCTCGAA
CGTCACCGTG ACAACGCCTT GTTCGTTGGC TTTGCGCCCG CCGAACATCC GAAAATCGCG
ATCTCGGTAA TGATCGAAAA CGGCGAGGCT GGTGGCCGAG TCGCAGGTCC GGTGGTGCGG
CAGATCATGG ACGCCTGGCT ACTCGACCAG GACGGTCACC TCAAGCCGCA ATACGCGGCG
CCGACCAAAG CGCCGGGCGA TCCTCACGTG TAA
|
|---|
| Protein sequence | MPEPIPIKDH EKETRLVNKR LIACALFVFA ISCALVVRLY ILQVVEFDYH STISENNRVH
VLPIPPTRGL IYDRNGVLLA DNRPSYNLTI TRERATDVNQ ELDEVINLLH LPAEDRAVFD
KAMKQSRHPF TPVTLFYELT EEQIAVLAVN EFRLPGLDVE PQFVRNYPLG AHFAHSIGYV
GRINEKESKT LDSVEYRGTQ SIGKTGIERF YEPQLHGHVG YEEVETNAQG RVLRVLKHTD
PIPGKNIVLS LDVKLQEAAE AALGDRRGSV VALDPSTGEV LAMVSNPSFD PNLFVTGISS
KEYSALRDSI DRPLFNRVLR GLYAPGSTIK PEVAIAGLDA GVVTPQTRVF DPGYYQLPDF
DHKYRNWNHS GDGWVDMDAA IMRSNDTYFY DLAHKLGIDR LHDYMAMFGL GEKVSLDMFE
ESPGLMPSQA WKRATRRQAW FPGETVILGI GQGYMQVTPL QLAQATALIA NKGVWNRPHL
AKTVDGVAPV DEHPMPNILL KDPRDWEQVN HGMQMVMHDA RGIARAAAAG AQYRIAGKSG
TAQVVAIKQG ERYNREKTLE RHRDNALFVG FAPAEHPKIA ISVMIENGEA GGRVAGPVVR
QIMDAWLLDQ DGHLKPQYAA PTKAPGDPHV
|
|---|
| |