Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3882 |
Symbol | |
ID | 3712528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4388733 |
End bp | 4390655 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | ABC transporter-like |
Protein accession | YP_349610 |
Protein GI | 77460103 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.153189 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGC TCAAATTCAG CGATGTGTCC CTTGCATTCG GCGCGATGCC GTTGTTGGAC AAGGTGTCCT GGCAGATCGC CCGTGGTGAG CGGGTGTGCA TCATCGGCCG CAACGGCACT GGCAAATCCA GCATGATGAA ACTGGTCAAG GGCGACCAGA AGCCTGATGA CGGCTCGGTG TGGCGTGCCC CCGGTCTGAA AATCGGTGAA TTGCCGCAGG AATTGCCTGT GGCCGACGAG CGGACAGTGT TCGACGTGGT TGCCGAAGGA CTCGACGGCG TTGGCGCTTT GCTCGCCGAA TACCATCACC TGAGCCAGAA CATCGTCACC GATGCCGATC TGGACAAGCT GATGCATGTT CAGCACGACC TCGAAGCCCG CGATGGCTGG CGCTTGCAGA CTTTGGTCGA CAGCACCCTG AGTCGTCTGC AATTGCCGGC CGACAAGACC CTCGCCGAAC TGTCCGGCGG CTGGCGTCGT CGCGTGCTGC TGGCGCAGGC GCTGGTGTCC GAGCCGGATC TGCTGCTGCT CGACGAGCCG ACCAACCACC TGGACATCGG TGCGATTGCC TGGCTTGAAG AAGCGCTGAA GGATTTCCAG GGCGCCGTGC TGTTCATCAC GCACGACCGT TCTTTCCTGC AAAACCTCGC CACCCGCATC CTTGAACTGG ATCGCGGCGG CCTGATCGAC TGGAACGGCG ACTACGCCAG TTTCCTCGTC CATAAAGAAG CCGCACTGGC CGCCGAAGAA ACCGCCAACG CGCTGTTCGA CAAGCGTCTG GCCCAGGAAG AAGTGTGGAT TCGTCAGGGC ATCAAGGCCC GTCGCACCCG TAACGAAGGC CGCGTGCGTG CTCTGAAAGC CCTGCGCGTG GAGCGCAGTG AGCGTCGCGA GCGCACCGGC AAGGCCAACA TCCAGCTGGA AACAGCGGAG AAGTCCGGCA AGCAGGTGAT GGTGCTGGAT AACGTGAGCT TCGCGCATCC GGGCGGTCCG TTCCTGATTC GCGATTTCTC CATGGTGCTG CAGCGCGGCG ACCGGATCGG TCTGCTCGGC GCCAACGGTA CCGGCAAAAC CACTTTGCTG AAACTGATGC TCAGCGGTCT GCAACCGACC AGCGGCAAAG TGGAAGAGGG CACCAAGATC GACGTGGCCT ACTTCGACCA GTTGCGCCAT CAGCTGGATC TGGAAAAAAC CGTGATCGAC AACGTCGCCG AAGGTCGTGA CTTCATCGAT ATCGACGGCC AGAGCCGCCA CGTACTGAGC TACCTCGGCG ACTTCCTGTT CAGCCCGCAG CGTGCCCGCA CGCCGGTGAA GGCGTTGTCC GGTGGTGAGC GTGCACGTTT GCTGCTGGCC AAGCTGTTCA GCAAGCCTGC AAACCTGCTG GTACTCGACG AACCGACCAA CGACCTCGAC GTGGAAACCC TCGAGCTGCT CGAAGAAGTG CTGCTGACCT TCAACGGCAC GGTGCTGATG GTCAGCCACG ACCGGGCATT CCTCGACAAC GTGGTTACCA GCACCTTGGT CTTCGAAGGT GAAGGCAAGG TTCGCGAATA CGTCGGCGGC TATCAGGACT GGATCCGTCA GGGTGGTTCG CCGCGTCTGC TGGGCGTGAC TGAAAGCAAA TCCGGCAAGG CCGATCTGAA TTCGGCGGTG GTGACTGCCG AACCGGCTCC GGTTGCCGCG CCGGTTGCTG CGGCCCCGGC TGCGAAGAAG AAACTGAGCT ACAAGCTTCA GCGTGAGCTG GAAGCGTTGC CGGGCGACAT CGACGCGAAG GAGCAGCAGA TTGCTGCTGT CGAGGCTGAA ATGGCCGAGG CCGGCTTCTA TCAGCGTCCG CCGGCCGAGA CGGCCAAGGT GATTGCTTCT CTGGAGCAGT TGCAGGCCGA GCTGGATGCG CTGGTGGAGC GTTGGGCTGA GCTGGACGCC TGA
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Protein sequence | MTLLKFSDVS LAFGAMPLLD KVSWQIARGE RVCIIGRNGT GKSSMMKLVK GDQKPDDGSV WRAPGLKIGE LPQELPVADE RTVFDVVAEG LDGVGALLAE YHHLSQNIVT DADLDKLMHV QHDLEARDGW RLQTLVDSTL SRLQLPADKT LAELSGGWRR RVLLAQALVS EPDLLLLDEP TNHLDIGAIA WLEEALKDFQ GAVLFITHDR SFLQNLATRI LELDRGGLID WNGDYASFLV HKEAALAAEE TANALFDKRL AQEEVWIRQG IKARRTRNEG RVRALKALRV ERSERRERTG KANIQLETAE KSGKQVMVLD NVSFAHPGGP FLIRDFSMVL QRGDRIGLLG ANGTGKTTLL KLMLSGLQPT SGKVEEGTKI DVAYFDQLRH QLDLEKTVID NVAEGRDFID IDGQSRHVLS YLGDFLFSPQ RARTPVKALS GGERARLLLA KLFSKPANLL VLDEPTNDLD VETLELLEEV LLTFNGTVLM VSHDRAFLDN VVTSTLVFEG EGKVREYVGG YQDWIRQGGS PRLLGVTESK SGKADLNSAV VTAEPAPVAA PVAAAPAAKK KLSYKLQREL EALPGDIDAK EQQIAAVEAE MAEAGFYQRP PAETAKVIAS LEQLQAELDA LVERWAELDA
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