Gene Pfl01_3862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3862 
Symbol 
ID3712292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4362990 
End bp4364384 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content60% 
IMG OID 
Productsoluble pyridine nucleotide transhydrogenase 
Protein accessionYP_349590 
Protein GI77460083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGTCT ACAACTACGA CGTGGTGGTG CTGGGTTCCG GCCCGGCGGG AGAAGGCGCG 
GCAATGAACG CCGCCAAAGC AGGGCGCAAG GTGGCGATGG TCGATAGCCG TCGCCAGGTC
GGCGGCAACT GCACCCACCT GGGCACCATC CCGTCCAAGG CCCTGCGTCA CTCGGTGCGG
CAGATCATGC AGTTCAACAC CAATCCGATG TTCCGTGCGA TCGGCGAGCC GCGCTGGTTC
TCCTTCCCGG ATGTGTTGAA AAGCGCCGAG AAAGTCATCT CCAAGCAAGT CGCTTCGCGT
ACCGGCTACT ACGCCCGTAA CCGCGTCGAC GTGTTTTTCG GCACCGGCAG CTTTGCCGAC
GAGCAAACCA TCGAAGTGGT CTGCGCCAAC GGCGTGGTCG AAAAACTGGT GGCCAAGCAC
ATCATCATCG CCACCGGTTC GCGTCCTTAT CGCCCGGCGG ACATCGATTT CCACCACCCG
CGTATCTACG ATAGCGACAC TATCCTCAGC CTCGGCCACA CCCCGCGCAA ACTGATCGTT
TACGGCGCCG GCGTGATCGG TTGCGAATAC GCTTCTATCT TCAGTGGTCT GGGCGTGCTG
GTCGAGCTGG TGGACAACCG CGGCCAGTTG CTGAGCTTCC TCGACTCGGA AATCTCCCAG
GCGTTGAGCT ACCACTTCAG CAACAACAAC ATCACCGTGC GTCACAACGA AGAATATGAC
CGCGTCGAAG GCGTGGACAA CGGCGTGATC CTGCACCTGA AGTCCGGCAA GAAGATCAAG
GCCGATGCCT TGCTCTGGTG CAACGGCCGT ACCGGTAACA CCGATCAGTT GGGTCTGGAA
AACATCGGGG TCAAGGTCAA CAGCCGTGGC CAGATCGAAG TCGACGAGAA TTACCGTACC
TGCGTGCAGA ACATCTATGG CGCCGGTGAC GTGATCGGCT GGCCGAGCCT GGCCAGTGCC
GCCCACGACC AGGGCCGTTC GGCCGCTGGC AGCATCGTCG ACAATGGCAG CTGGCGCTTC
GTGAATGACG TGCCGACCGG CATCTACACC ATTCCGGAGA TCAGCTCGAT CGGCAAGAAC
GAGCAGGAAC TGACCCAGGC CAAAGTGCCG TATGAAGTGG GCAAGGCGTT CTTCAAGAGC
ATGGCGCGGG CACAGATCGC CGGCGAGCCG CAAGGCATGC TGAAGATCCT GTTCCACCGT
GAAACCCTGG AAGTGCTGGG CGTTCACTGC TTCGGTTATC AGGCGTCGGA GATCGTGCAC
ATCGGTCAGG CGATCATGAA CCAGCCAGGT GAGCTGAATA CTCTGAAATA CTTCGTCAAC
ACGACGTTCA ACTACCCGAC CATGGCCGAA GCCTATCGGG TAGCGGCGTA CGACGGCCTC
AACCGGCTTT TTTGA
 
Protein sequence
MAVYNYDVVV LGSGPAGEGA AMNAAKAGRK VAMVDSRRQV GGNCTHLGTI PSKALRHSVR 
QIMQFNTNPM FRAIGEPRWF SFPDVLKSAE KVISKQVASR TGYYARNRVD VFFGTGSFAD
EQTIEVVCAN GVVEKLVAKH IIIATGSRPY RPADIDFHHP RIYDSDTILS LGHTPRKLIV
YGAGVIGCEY ASIFSGLGVL VELVDNRGQL LSFLDSEISQ ALSYHFSNNN ITVRHNEEYD
RVEGVDNGVI LHLKSGKKIK ADALLWCNGR TGNTDQLGLE NIGVKVNSRG QIEVDENYRT
CVQNIYGAGD VIGWPSLASA AHDQGRSAAG SIVDNGSWRF VNDVPTGIYT IPEISSIGKN
EQELTQAKVP YEVGKAFFKS MARAQIAGEP QGMLKILFHR ETLEVLGVHC FGYQASEIVH
IGQAIMNQPG ELNTLKYFVN TTFNYPTMAE AYRVAAYDGL NRLF