Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3862 |
Symbol | |
ID | 3712292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4362990 |
End bp | 4364384 |
Gene Length | 1395 bp |
Protein Length | 464 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | soluble pyridine nucleotide transhydrogenase |
Protein accession | YP_349590 |
Protein GI | 77460083 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGTCT ACAACTACGA CGTGGTGGTG CTGGGTTCCG GCCCGGCGGG AGAAGGCGCG GCAATGAACG CCGCCAAAGC AGGGCGCAAG GTGGCGATGG TCGATAGCCG TCGCCAGGTC GGCGGCAACT GCACCCACCT GGGCACCATC CCGTCCAAGG CCCTGCGTCA CTCGGTGCGG CAGATCATGC AGTTCAACAC CAATCCGATG TTCCGTGCGA TCGGCGAGCC GCGCTGGTTC TCCTTCCCGG ATGTGTTGAA AAGCGCCGAG AAAGTCATCT CCAAGCAAGT CGCTTCGCGT ACCGGCTACT ACGCCCGTAA CCGCGTCGAC GTGTTTTTCG GCACCGGCAG CTTTGCCGAC GAGCAAACCA TCGAAGTGGT CTGCGCCAAC GGCGTGGTCG AAAAACTGGT GGCCAAGCAC ATCATCATCG CCACCGGTTC GCGTCCTTAT CGCCCGGCGG ACATCGATTT CCACCACCCG CGTATCTACG ATAGCGACAC TATCCTCAGC CTCGGCCACA CCCCGCGCAA ACTGATCGTT TACGGCGCCG GCGTGATCGG TTGCGAATAC GCTTCTATCT TCAGTGGTCT GGGCGTGCTG GTCGAGCTGG TGGACAACCG CGGCCAGTTG CTGAGCTTCC TCGACTCGGA AATCTCCCAG GCGTTGAGCT ACCACTTCAG CAACAACAAC ATCACCGTGC GTCACAACGA AGAATATGAC CGCGTCGAAG GCGTGGACAA CGGCGTGATC CTGCACCTGA AGTCCGGCAA GAAGATCAAG GCCGATGCCT TGCTCTGGTG CAACGGCCGT ACCGGTAACA CCGATCAGTT GGGTCTGGAA AACATCGGGG TCAAGGTCAA CAGCCGTGGC CAGATCGAAG TCGACGAGAA TTACCGTACC TGCGTGCAGA ACATCTATGG CGCCGGTGAC GTGATCGGCT GGCCGAGCCT GGCCAGTGCC GCCCACGACC AGGGCCGTTC GGCCGCTGGC AGCATCGTCG ACAATGGCAG CTGGCGCTTC GTGAATGACG TGCCGACCGG CATCTACACC ATTCCGGAGA TCAGCTCGAT CGGCAAGAAC GAGCAGGAAC TGACCCAGGC CAAAGTGCCG TATGAAGTGG GCAAGGCGTT CTTCAAGAGC ATGGCGCGGG CACAGATCGC CGGCGAGCCG CAAGGCATGC TGAAGATCCT GTTCCACCGT GAAACCCTGG AAGTGCTGGG CGTTCACTGC TTCGGTTATC AGGCGTCGGA GATCGTGCAC ATCGGTCAGG CGATCATGAA CCAGCCAGGT GAGCTGAATA CTCTGAAATA CTTCGTCAAC ACGACGTTCA ACTACCCGAC CATGGCCGAA GCCTATCGGG TAGCGGCGTA CGACGGCCTC AACCGGCTTT TTTGA
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Protein sequence | MAVYNYDVVV LGSGPAGEGA AMNAAKAGRK VAMVDSRRQV GGNCTHLGTI PSKALRHSVR QIMQFNTNPM FRAIGEPRWF SFPDVLKSAE KVISKQVASR TGYYARNRVD VFFGTGSFAD EQTIEVVCAN GVVEKLVAKH IIIATGSRPY RPADIDFHHP RIYDSDTILS LGHTPRKLIV YGAGVIGCEY ASIFSGLGVL VELVDNRGQL LSFLDSEISQ ALSYHFSNNN ITVRHNEEYD RVEGVDNGVI LHLKSGKKIK ADALLWCNGR TGNTDQLGLE NIGVKVNSRG QIEVDENYRT CVQNIYGAGD VIGWPSLASA AHDQGRSAAG SIVDNGSWRF VNDVPTGIYT IPEISSIGKN EQELTQAKVP YEVGKAFFKS MARAQIAGEP QGMLKILFHR ETLEVLGVHC FGYQASEIVH IGQAIMNQPG ELNTLKYFVN TTFNYPTMAE AYRVAAYDGL NRLF
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