Gene Pfl01_3855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3855 
Symbol 
ID3712285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4356235 
End bp4356915 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content62% 
IMG OID 
Producttwo component heavy metal response transcriptional regulator 
Protein accessionYP_349583 
Protein GI77460076 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.845216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC TGATCGTCGA AGACCAACCC AAAACCGGCC AGTACCTGCG CCAGGGCCTG 
ACCGAGGCCG GTTTCAACAC CGAACTGGTG GCCGACGGCA CCACCGGCCA GCAATTGGCG
TTGAGTGGCG ACTATGCGCT GCTGATCCTC GATGTGATGC TGCCCGGACG CAATGGCTGG
CAGATCCTGC AGGCGGTGCG CAGCGCCGGC CTGGAAACAC CGATCCTGTT TTTGACCGCC
AAGGACACCG TGGAAGATAG GGTTCACGGC CTCGAACTGG GCGCCGACGA CTACCTGGTC
AAACCGTTCG CTTTCTCCGA ACTGCTGGCG CGGGTGCGCA GCCTGTTACG CCGCGGCAGT
TCCACGCCCC AGGAAACCAG CCTGCGCCTG GCCGATCTGA GTCTGGATCT GATCCGCCGC
CGGGTCGAAC GCAGCGGTCA ACGCATCGAC CTCACCGCCA AAGAGTTCGC CCTGCTGGAA
ATGCTCCTGC GCCGTCAGGG CGAAGTGCTG CCCAAGTCAC TGATCGCCTC GCAGGTCTGG
GACATGAACT TCGACAGCGA CACCAATGTG ATCGAAGTGG CGATTCGTCG ACTGCGCCTG
AAGATCGATG ACGACTTCCC CAACAAGCTG ATCCACACCG TACGCGGCAT GGGTTACGTC
CTTGAAGAGC GTGCCGACTG A
 
Protein sequence
MKLLIVEDQP KTGQYLRQGL TEAGFNTELV ADGTTGQQLA LSGDYALLIL DVMLPGRNGW 
QILQAVRSAG LETPILFLTA KDTVEDRVHG LELGADDYLV KPFAFSELLA RVRSLLRRGS
STPQETSLRL ADLSLDLIRR RVERSGQRID LTAKEFALLE MLLRRQGEVL PKSLIASQVW
DMNFDSDTNV IEVAIRRLRL KIDDDFPNKL IHTVRGMGYV LEERAD