Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3803 |
Symbol | |
ID | 3714773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4305669 |
End bp | 4306526 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_349532 |
Protein GI | 77460025 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.180645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGATC TGGAACTGCT GAAAACCTTC GTCTGCGTGG TCGATGAAGG CAGCTTCACC CGCGCCGCCG AACGCGTCCA CCGCACCCAG TCAACGGTCA GCCAACAGGT GCGCAAACTC GAAGACCTGG TCGGCCACGC GCTGCTGTTG CGCGACCGCA CCGGGCTGAA CGTCAGCGTC ACCGAGCACG GCGAACTGCT GATTCATTAC GCCCGCCGCC TGCTGGCCTT GTCGGCCGAG GCCAGCGAAG CCCTGGCCAG CGATCTGGAT CTGGAAATCC TGCGCATCGG CATGCCGGAA GACTTCGACG CCCGACGCAT GGCGCTGATC CTCGCCGGCT TCACCCGCAG CCACCCGCAA GCACGGCTGG AAACCGTCAG CGGCATGAGC CTCGACCTGC GCCAACGCCT CGACAGCGGC GAAATCGACA TCGCCCTGAT CAAACGCGAA CCCGACAGCG GCCCGGCCTG GGCGACCTGG CCGGAGCGAC TCGTTTGGGT CAAAGGCACG GAATTCGACT CATCCATTGG CGTGTTGCCG CTGGCATTGT TTCCCCAAGG CTGCCTTTAC AGGCAACGGG CGATCCGCCT GCTTGACGTG GCGCAACGCC CCTGGCGGGT GGCCTTCGGC AGCCACAGTC TGACCGGCAT TCAAGCGGCG GTGGCCTCAG GGCTTGGGGT TTCGGTGCTG CCGGCGTCGG CGGTGTTGCC GGAGCATCGG GTGTGCACGG ACTTGCCGCC GCTGCCGCCG ACGGAGCTGG CGCTGGTCAG CCGCGAGGGG GTGTTGAGCG GATTGCAGCG GGGGTTGGTG GAGTTTTTGC GCGGGGAATT GGGGGTGGAT GCAGGGGGAT TTGCTTGA
|
Protein sequence | MLDLELLKTF VCVVDEGSFT RAAERVHRTQ STVSQQVRKL EDLVGHALLL RDRTGLNVSV TEHGELLIHY ARRLLALSAE ASEALASDLD LEILRIGMPE DFDARRMALI LAGFTRSHPQ ARLETVSGMS LDLRQRLDSG EIDIALIKRE PDSGPAWATW PERLVWVKGT EFDSSIGVLP LALFPQGCLY RQRAIRLLDV AQRPWRVAFG SHSLTGIQAA VASGLGVSVL PASAVLPEHR VCTDLPPLPP TELALVSREG VLSGLQRGLV EFLRGELGVD AGGFA
|
| |