Gene Pfl01_3772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3772 
Symbol 
ID3714704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4270074 
End bp4270742 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content65% 
IMG OID 
Producttwo component transcriptional regulator 
Protein accessionYP_349501 
Protein GI77459994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.701851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTGC TTCTGGTGGA AGACCACGTA CCGCTGGCCG ACGAACTGCT CGCCGGCCTG 
CAACGTCAGG GCTACGCGGT GGACTGGCTG GCGGACGGGC GCGACGCGGT CTATCAGGGC
AGCAGCGAGC CCTATGACCT AATCGTCCTC GACCTCGGTC TGCCCGGCGT GCCGGGGCTT
GAGGTGCTGG CGCAATGGCG CGCTGGCGGT CTGACGATTC CGGTGCTGAT TCTCACCGCC
CGCGACTCCT GGGCCGAGCG CATCGAAGGC CTGAAGGCCG GCGCCGACGA TTACCTGACC
AAACCTTTCC ACCCGGAAGA ACTGTACTTG CGCATCCAGT CGCTGCTGCG CCGCTCCAAG
GGCCAGGCCA ACCAGCCGAC GCTCAAGGCT GCCGGGCTGC ACTTGGACGA GGGCCGTCAG
TGTGTCGTGC GCGACGGTGC CGACATTCAG CTGACCGCCG CCGAATTCCG TCTGCTGCGC
TACTTCATGC TGCACCCGGA GCAGATCCTT TCCAAGAGCC ACCTCGCCGA ACACCTCTAC
GACGGTGAGA CCGAGCGTGA TTCCAACGTG CTGGAAGTCC ACGTCAACCA CCTGCGGCGC
AAGCTCGGCA AGAGCGTGAT CGAAACCCGT CGTGGTCAGG GTTATCTGTT TGGCGGACAG
GCTTCGTGA
 
Protein sequence
MRLLLVEDHV PLADELLAGL QRQGYAVDWL ADGRDAVYQG SSEPYDLIVL DLGLPGVPGL 
EVLAQWRAGG LTIPVLILTA RDSWAERIEG LKAGADDYLT KPFHPEELYL RIQSLLRRSK
GQANQPTLKA AGLHLDEGRQ CVVRDGADIQ LTAAEFRLLR YFMLHPEQIL SKSHLAEHLY
DGETERDSNV LEVHVNHLRR KLGKSVIETR RGQGYLFGGQ AS