Gene Pfl01_3769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3769 
Symbol 
ID3714701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4264919 
End bp4266235 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content62% 
IMG OID 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_349498 
Protein GI77459991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAG TGATTGCTGC GGTCGGCGTC ATGCTGATCC TCAGCCTGTC CCGGGTGCAT 
GTGGTGATCG CGTTGATCGT CGGTGCGCTG GTCGGTGGCC TGACCGGTGG TCTGGGCATC
GACGCCACGC TCAAGGCTTT CAACAGTGGC CTGGGTGGCG GGGCGACAGT GGCGTTGTCC
TACGCGTTGC TCGGCGCTTT CGCCGTGGCG ATTGCCAAGT CCGGCCTGGC CCACGCGCTG
GCCGACAAGG CCCTGGCGAT GGTCGACCGC CAGCATGCGA CCGGTGGCGG CAGCGTCAAA
TGGCTGCTGA TCGGCCTGCT GTGGGTGGTG GCGATCGCGT CGCAGAACAT CCTGCCGATT
CACATCGCGT TCATTCCGCT GCTGGTGCCG CCGCTTCTCT ATGTATTGAC CAAGCTGCAA
CTGGACCGAC GCCTGATCGC CTGCGTCATG ACCTTCGGCC TGATCACGCC GTACATGTTC
CTGCCGGTGG GCTTCGGCAA CATTTTCCTC AACGAGATCC TGCTGGCCAA CGTTGCCCGC
AGTGGCGTGG ACATCAGCGG TATCAACGTC ACCCATGCCA TGGGGATTCC GGCGCTGGGC
ATGCTGGTGG GGCTGGGCAT CGCTTTTATC AGCTATCGCA AGAAGCGCGT CTACGACTTG
GGCAAAATCG AGCAGGTCGA GCAGGTGGCG GTGCAGTACA ACCCGCGAAG CCTGTTGATC
GCCGGAGTCG CCATTGCCGC AGCCTTCATT ATTCAGTTGC TGCTGGATTC GATGATTATC
GGGGCGCTGA CCGGTTTCCT GATCTTTTCA GCGTCGGGCA TCGTCAAATG GCGCGAGACG
GATGACCTGT TTACCGAAGG CATGAAGATG ATGGCGATGA TCGGCTTCAT CATGATCGCC
GCTTCCGGAT TCGCCGAAGT GATGAAGGCC ACCGGCGAGG TGCAGACCCT GGTCGAGTCT
TCGGCGTCGT GGATCAATCA CAGCAAGGGC ATCGGTGCGT TGCTGATGCT GCTGGTCGGT
CTTCTGGTGA CCATGGGCAT CGGCTCGTCG TTTTCCACGG TGCCGATTCT GGCGGCGATT
TTCGTGCCGC TGTGCGTGCA ACTGGGCTTC AGCCCGATTG CCATTGTCTG CATCGTCGGC
ACGGCCGGTG CCTTGGGCGA TGCCGGTTCG CCCGCGTCCG ACTCGACCCT TGGCCCGACC
TCCGGTCTGA ACATCGACGG CCAGCACCAT CACATCTGGG ACACCGTGGT CCCGACTTTC
CTGCATTACA ACCTGCCGCT GCTGGCGTTT GGCTGGGTGG CTGCGATGGT CCTTTAA
 
Protein sequence
MNAVIAAVGV MLILSLSRVH VVIALIVGAL VGGLTGGLGI DATLKAFNSG LGGGATVALS 
YALLGAFAVA IAKSGLAHAL ADKALAMVDR QHATGGGSVK WLLIGLLWVV AIASQNILPI
HIAFIPLLVP PLLYVLTKLQ LDRRLIACVM TFGLITPYMF LPVGFGNIFL NEILLANVAR
SGVDISGINV THAMGIPALG MLVGLGIAFI SYRKKRVYDL GKIEQVEQVA VQYNPRSLLI
AGVAIAAAFI IQLLLDSMII GALTGFLIFS ASGIVKWRET DDLFTEGMKM MAMIGFIMIA
ASGFAEVMKA TGEVQTLVES SASWINHSKG IGALLMLLVG LLVTMGIGSS FSTVPILAAI
FVPLCVQLGF SPIAIVCIVG TAGALGDAGS PASDSTLGPT SGLNIDGQHH HIWDTVVPTF
LHYNLPLLAF GWVAAMVL