Gene Pfl01_3749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3749 
Symbol 
ID3714661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4236609 
End bp4237697 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349478 
Protein GI77459971 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.793318 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.98827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACCC CACGATTATT CGTCAGCCTC GCCGCGCTGC TGGTACTGGC CGGTTGCGCC 
GGTCAACGCA GCGAAGAACC GGCGCCGCGC CCGCCCGCCG AGGTCAAGGC GCAGATCGTG
CGCCTGCTGC CGGCGAAAAC CGTCGACCGC CAGGGCTGGG CCACTGACAT CTACGCTGCT
TTCGCCGCTC AGGGCATCAG CCCGACCACG CAGAATCTGT GTTCGGTGCT GGCCGTCACC
GAGCAGGAAT CCACCTTTCA GGTCGATCCG CCAGTGCCGG GCCTGGGCAA GATCGCCCGT
GACGAAATCG ACCGCCGCGC CGCCAAGGTG CATATCCCGA GCCTGTTGGT CAGCGGCGCC
TTGCAGGTGC GTTCGCCGAA CGGCAAGACC TATAGCGAAC GCCTGAGCGC CGCCCGCAGC
GAAAAGGAAT TGAGCGCGAT TTTCGACGAC TTCATCGGCT CGGTGCCGAT GGGCCGGACA
CTGTTCAGCG GTTTCAACCC GGTGCACACC GGCGGGCCGA TGCAGGTCAG CATCGAATTC
GCCGAGCAGC ATGCCAAGGA CTATCCGTAC CCGGTGGACG GGACGATTCG TCGCGAGGTG
TTCAGCCGTC GCGGCGGCAT GTATTTCGGC ATCGCCCATT TGCTTGGTTA TCCAGTGAGT
TATCGCGAGC CGCTGTACCG CTTCGCCGAC TTCAACGCCG GCTGGTACGC CAGTCGCAAT
GCGGCGTTTC AGAACGCGGT CAGCCGGGCG TCGGGGATTC CGCTGGCGCT GGATGGCGAC
CTGATCCGCC CGGGCGCGAT CATGCCGGGC AGCACTGAAC TGGCGGTGCG CACCCTCGGC
AAATCCCTGG GCATGCGCAA TCCGGTGATC CGCGATCAAC TGGAGAAGGG CGATAGCCTG
GCCTTCGAGG AGACCAAACT GTATCAACGG GTCTTCGAAC TGGCGGAGCG TGCGGAAGGC
AAGACATTGC CCCGTGCGGT GCTGCCGGGC ATCGTGCTGC AGAGCCCGAA GATCACCCGC
AAACTGACCA CGGCGTGGTT TGCCAAACGG GTCGACGAGC GTTATCGGCG CTGCATGGCC
AAGGGCTGA
 
Protein sequence
MHTPRLFVSL AALLVLAGCA GQRSEEPAPR PPAEVKAQIV RLLPAKTVDR QGWATDIYAA 
FAAQGISPTT QNLCSVLAVT EQESTFQVDP PVPGLGKIAR DEIDRRAAKV HIPSLLVSGA
LQVRSPNGKT YSERLSAARS EKELSAIFDD FIGSVPMGRT LFSGFNPVHT GGPMQVSIEF
AEQHAKDYPY PVDGTIRREV FSRRGGMYFG IAHLLGYPVS YREPLYRFAD FNAGWYASRN
AAFQNAVSRA SGIPLALDGD LIRPGAIMPG STELAVRTLG KSLGMRNPVI RDQLEKGDSL
AFEETKLYQR VFELAERAEG KTLPRAVLPG IVLQSPKITR KLTTAWFAKR VDERYRRCMA
KG