Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3740 |
Symbol | |
ID | 3714652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4225635 |
End bp | 4228340 |
Gene Length | 2706 bp |
Protein Length | 901 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | TonB-dependent receptor |
Protein accession | YP_349469 |
Protein GI | 77459962 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.488195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGATGA ACACTCCACG CTTCACGCTC AAACCCTTGG TGGCGACGAT TTCCCGCCAC CGTTTCGTTC CGTTGTACCT GGTGGCCATG GGGATGGGCG CCGGGGTTCA GGCCGCCGAG GACGACAACG GCGTCCCGGC CGCCGCTGCG GTGGTTGCGC CGACCACGCA ACTGCAACGG GTCGAAGTGA CCGGTTCGGC GATTCGCCGG GTCGATGCGG AAACGGCGGT GCCGATCACC GTGCTCAAGG CCGATGAACT GCGCAAACAG GGCGTGACCA CCACCGCCGA ACTGGTGCAG CGCATCACCG GCAGCCAGTC GATCAACAAC AGCGCAGGCT CGGTCGGCGC AGCCACCGGC GGCGCATCGT TTGCCGACAT GCGCGGCATC GGCGCGAACA AGACGCTGGT GCTGCTCAAC GGTCGCCGAC TGGCCAACAA CGCCCTGTCG GGCACCAACT CGGCCGGCGG CGCGGTGGAT CTGAACATGA TCCCGTTTGC CGCGATCGAG CGCGTGGAAG TGCTGCGCGA CGGCGCCTCG GCCCTGTACG GCACCGACGC CATCGGCGGC GTGATCAACT TCATCACCAA GAAATCCATG ACCGACGGCC AGCTCACCCT CGGCGGCGAA ACCCCAACCC ACAGCGGCGG CGGTGCGACC AAGGACATGA GCGCCAGTTG GGGCTACGGC GATCTGGAGC AGGACCGCTT CAACGTGCTC GGTGTGTTCA ACTACAACAA GCAACAGAAC CTCGACGCCA ACGACCGCTC CTTCGCCCGT GACTACGTGC CCGGCCGAGG TCTCGACCAG ACCTCCGGCA CCGCGTTCCC CGGCAACTAC AGCCAGAACG GCAACGCCAC CAACCCGCTG GCCAACAGCA ATTGCAACGG CCCCAACCTG GTGGCCCGCG ACGGCCTCTG CCGCTTCAGC ACCCGGGAAT TCATCGACCT GGTGCCGCAG ACCGAGAAGA CGTCGTTCTT CGGCAAGACC ACCGGCAAAC TGGCCGACGA CCACAACGTC AACCTTGAAT ACTTCTGGTC GCGCAACAAC AACGCCACCG CTGTCGGCCC GGCGCCATTG ACCGGCCTGA GCCTGGATTC GTCCTCGCCC TACTACCCCG GCAACGGCAT CACCCCGGCG CCCACCGATT TTGCCCTCGA CCCGACGCAA CCGGTGGACG TGAACTGGCG CGAAACCGCC GCCGGCCCGC GTGAATCGAA AGACCAGAAC ACCAGCCAGC GCTTTTTGCT GAGCTTCGAC GGTCTGGTGG GCGGCTGGGA CTACAACGTC GGCGCCTCGT ACAACCAGAA CAAGATCGTC TCCAGCGTTA CCAGCGGCTA CGTCAGCGAT CAGGCGATGA TCGACGGTCT GGCCAGCGGC CTGCTCAACC CGTTCGGCCC GCAGACCAGC GCCGGTCAGC AATACATCGA CCAGGCCGCG TACCACGGCG CCTATTCCAC GGCGGTCGGT CGGGTCGCCG GTTTCGACGG GCGGATCAGT CGCGAAATCG GTGACTGGTT CGGCGCCGGC CCGTCGGGTC TGGCACTGGG CGGCGAGTAC CGCAAAGAGA AATTCCACCA GGACTTCGAA GCCTTCGCCG GCGACATCCA GAGCCTGGGC ATCGACCCGG CCGGCAGCGT CGAGGGCGAC CGCAGCGTTA AAGCCGCCTA CGCGGAAATC AACGTGCCGG TGCTCGACAG CCTGGAATTG TCCGCCGCCG TGCGTCACGA CAAATACAGC GACTTCGGCA GCACCACCAA CCCGAAATAT TCGTTCCGTT ATCAGCCGCT CAAGGAGCTG GTGGTGCGCG GCGCGTACAG CGAAGGCTTC CGCGCGCCGT CGCTGTATGA GTTGTATTCG CCGCGCAGCA TCACCTTCAC CCAGGGCTAC TACAACGACC CGGTGCTGTG TACTGGCGGC GTGGTGCAAC CGGGCGGCAA CGGCGGGCGC GATTGCGGTC AGCAGTTCCT CAACCAGATC GGCGGCAACG AAGACCTGGC CCCGGAGAAG GCGCGCAACG TGACGCTGGG CTTTGTCTAT CAGCCGGTCA GCAATCTGTC CGTGGGCCTG GATTTCTGGT GGATTCACAT CTCCAACCAG ATCCAGCCGT TCCCGGAATC CACCGTGTTC GATCAGGCCG GCAGCTACCC TGACCGCTTC GTGCGCAACG CCGACGGCAC GCTCAATTAC ATCGTCACCG GCAACGCCAA CCTCGGCATC GTCGAAACCA ACGGCGTCGA TGTGTCGCTG GACTATCGCT TCCCGAACAC GCCGTACGGT CAATTCGGCC TGGGCCTGCA AGGCACTTAT GTCGACGAGT ACGACTTCCA GAGCACCATC AAGGGCCCGT TCACCGACAA GGTCGGCGAC TTCCGGGGTG ACGGTGTGAT CGCCCGCTGG AAACACAACC TGACCGGTTC CTGGACCTTC GGCGCCGCCC GCGCGGCACT GACCAACCGC TTCACCACCG GCTACAACGA CTACGACCGC GAGACCAACG CGCGGGTCGC GTCGTACTCG GTGTGGGACC TGTCGGCCGG TTACACCTTC GACAAGGTGC TGGACGTCGA TGCCGGGGTG AAGAACCTGT TCGACCGCGA TCCGCCGTTC TCCAACCAGG CCTACAACTT CCAGAGCGGT TATGACCCGC GCTACACCGA TCCGCTGGGC CGTACGCTGT TTGCGCGCAT GACGTACCAC TTCTGA
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Protein sequence | MLMNTPRFTL KPLVATISRH RFVPLYLVAM GMGAGVQAAE DDNGVPAAAA VVAPTTQLQR VEVTGSAIRR VDAETAVPIT VLKADELRKQ GVTTTAELVQ RITGSQSINN SAGSVGAATG GASFADMRGI GANKTLVLLN GRRLANNALS GTNSAGGAVD LNMIPFAAIE RVEVLRDGAS ALYGTDAIGG VINFITKKSM TDGQLTLGGE TPTHSGGGAT KDMSASWGYG DLEQDRFNVL GVFNYNKQQN LDANDRSFAR DYVPGRGLDQ TSGTAFPGNY SQNGNATNPL ANSNCNGPNL VARDGLCRFS TREFIDLVPQ TEKTSFFGKT TGKLADDHNV NLEYFWSRNN NATAVGPAPL TGLSLDSSSP YYPGNGITPA PTDFALDPTQ PVDVNWRETA AGPRESKDQN TSQRFLLSFD GLVGGWDYNV GASYNQNKIV SSVTSGYVSD QAMIDGLASG LLNPFGPQTS AGQQYIDQAA YHGAYSTAVG RVAGFDGRIS REIGDWFGAG PSGLALGGEY RKEKFHQDFE AFAGDIQSLG IDPAGSVEGD RSVKAAYAEI NVPVLDSLEL SAAVRHDKYS DFGSTTNPKY SFRYQPLKEL VVRGAYSEGF RAPSLYELYS PRSITFTQGY YNDPVLCTGG VVQPGGNGGR DCGQQFLNQI GGNEDLAPEK ARNVTLGFVY QPVSNLSVGL DFWWIHISNQ IQPFPESTVF DQAGSYPDRF VRNADGTLNY IVTGNANLGI VETNGVDVSL DYRFPNTPYG QFGLGLQGTY VDEYDFQSTI KGPFTDKVGD FRGDGVIARW KHNLTGSWTF GAARAALTNR FTTGYNDYDR ETNARVASYS VWDLSAGYTF DKVLDVDAGV KNLFDRDPPF SNQAYNFQSG YDPRYTDPLG RTLFARMTYH F
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