Gene Pfl01_3740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3740 
Symbol 
ID3714652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4225635 
End bp4228340 
Gene Length2706 bp 
Protein Length901 aa 
Translation table11 
GC content64% 
IMG OID 
ProductTonB-dependent receptor 
Protein accessionYP_349469 
Protein GI77459962 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.488195 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATGA ACACTCCACG CTTCACGCTC AAACCCTTGG TGGCGACGAT TTCCCGCCAC 
CGTTTCGTTC CGTTGTACCT GGTGGCCATG GGGATGGGCG CCGGGGTTCA GGCCGCCGAG
GACGACAACG GCGTCCCGGC CGCCGCTGCG GTGGTTGCGC CGACCACGCA ACTGCAACGG
GTCGAAGTGA CCGGTTCGGC GATTCGCCGG GTCGATGCGG AAACGGCGGT GCCGATCACC
GTGCTCAAGG CCGATGAACT GCGCAAACAG GGCGTGACCA CCACCGCCGA ACTGGTGCAG
CGCATCACCG GCAGCCAGTC GATCAACAAC AGCGCAGGCT CGGTCGGCGC AGCCACCGGC
GGCGCATCGT TTGCCGACAT GCGCGGCATC GGCGCGAACA AGACGCTGGT GCTGCTCAAC
GGTCGCCGAC TGGCCAACAA CGCCCTGTCG GGCACCAACT CGGCCGGCGG CGCGGTGGAT
CTGAACATGA TCCCGTTTGC CGCGATCGAG CGCGTGGAAG TGCTGCGCGA CGGCGCCTCG
GCCCTGTACG GCACCGACGC CATCGGCGGC GTGATCAACT TCATCACCAA GAAATCCATG
ACCGACGGCC AGCTCACCCT CGGCGGCGAA ACCCCAACCC ACAGCGGCGG CGGTGCGACC
AAGGACATGA GCGCCAGTTG GGGCTACGGC GATCTGGAGC AGGACCGCTT CAACGTGCTC
GGTGTGTTCA ACTACAACAA GCAACAGAAC CTCGACGCCA ACGACCGCTC CTTCGCCCGT
GACTACGTGC CCGGCCGAGG TCTCGACCAG ACCTCCGGCA CCGCGTTCCC CGGCAACTAC
AGCCAGAACG GCAACGCCAC CAACCCGCTG GCCAACAGCA ATTGCAACGG CCCCAACCTG
GTGGCCCGCG ACGGCCTCTG CCGCTTCAGC ACCCGGGAAT TCATCGACCT GGTGCCGCAG
ACCGAGAAGA CGTCGTTCTT CGGCAAGACC ACCGGCAAAC TGGCCGACGA CCACAACGTC
AACCTTGAAT ACTTCTGGTC GCGCAACAAC AACGCCACCG CTGTCGGCCC GGCGCCATTG
ACCGGCCTGA GCCTGGATTC GTCCTCGCCC TACTACCCCG GCAACGGCAT CACCCCGGCG
CCCACCGATT TTGCCCTCGA CCCGACGCAA CCGGTGGACG TGAACTGGCG CGAAACCGCC
GCCGGCCCGC GTGAATCGAA AGACCAGAAC ACCAGCCAGC GCTTTTTGCT GAGCTTCGAC
GGTCTGGTGG GCGGCTGGGA CTACAACGTC GGCGCCTCGT ACAACCAGAA CAAGATCGTC
TCCAGCGTTA CCAGCGGCTA CGTCAGCGAT CAGGCGATGA TCGACGGTCT GGCCAGCGGC
CTGCTCAACC CGTTCGGCCC GCAGACCAGC GCCGGTCAGC AATACATCGA CCAGGCCGCG
TACCACGGCG CCTATTCCAC GGCGGTCGGT CGGGTCGCCG GTTTCGACGG GCGGATCAGT
CGCGAAATCG GTGACTGGTT CGGCGCCGGC CCGTCGGGTC TGGCACTGGG CGGCGAGTAC
CGCAAAGAGA AATTCCACCA GGACTTCGAA GCCTTCGCCG GCGACATCCA GAGCCTGGGC
ATCGACCCGG CCGGCAGCGT CGAGGGCGAC CGCAGCGTTA AAGCCGCCTA CGCGGAAATC
AACGTGCCGG TGCTCGACAG CCTGGAATTG TCCGCCGCCG TGCGTCACGA CAAATACAGC
GACTTCGGCA GCACCACCAA CCCGAAATAT TCGTTCCGTT ATCAGCCGCT CAAGGAGCTG
GTGGTGCGCG GCGCGTACAG CGAAGGCTTC CGCGCGCCGT CGCTGTATGA GTTGTATTCG
CCGCGCAGCA TCACCTTCAC CCAGGGCTAC TACAACGACC CGGTGCTGTG TACTGGCGGC
GTGGTGCAAC CGGGCGGCAA CGGCGGGCGC GATTGCGGTC AGCAGTTCCT CAACCAGATC
GGCGGCAACG AAGACCTGGC CCCGGAGAAG GCGCGCAACG TGACGCTGGG CTTTGTCTAT
CAGCCGGTCA GCAATCTGTC CGTGGGCCTG GATTTCTGGT GGATTCACAT CTCCAACCAG
ATCCAGCCGT TCCCGGAATC CACCGTGTTC GATCAGGCCG GCAGCTACCC TGACCGCTTC
GTGCGCAACG CCGACGGCAC GCTCAATTAC ATCGTCACCG GCAACGCCAA CCTCGGCATC
GTCGAAACCA ACGGCGTCGA TGTGTCGCTG GACTATCGCT TCCCGAACAC GCCGTACGGT
CAATTCGGCC TGGGCCTGCA AGGCACTTAT GTCGACGAGT ACGACTTCCA GAGCACCATC
AAGGGCCCGT TCACCGACAA GGTCGGCGAC TTCCGGGGTG ACGGTGTGAT CGCCCGCTGG
AAACACAACC TGACCGGTTC CTGGACCTTC GGCGCCGCCC GCGCGGCACT GACCAACCGC
TTCACCACCG GCTACAACGA CTACGACCGC GAGACCAACG CGCGGGTCGC GTCGTACTCG
GTGTGGGACC TGTCGGCCGG TTACACCTTC GACAAGGTGC TGGACGTCGA TGCCGGGGTG
AAGAACCTGT TCGACCGCGA TCCGCCGTTC TCCAACCAGG CCTACAACTT CCAGAGCGGT
TATGACCCGC GCTACACCGA TCCGCTGGGC CGTACGCTGT TTGCGCGCAT GACGTACCAC
TTCTGA
 
Protein sequence
MLMNTPRFTL KPLVATISRH RFVPLYLVAM GMGAGVQAAE DDNGVPAAAA VVAPTTQLQR 
VEVTGSAIRR VDAETAVPIT VLKADELRKQ GVTTTAELVQ RITGSQSINN SAGSVGAATG
GASFADMRGI GANKTLVLLN GRRLANNALS GTNSAGGAVD LNMIPFAAIE RVEVLRDGAS
ALYGTDAIGG VINFITKKSM TDGQLTLGGE TPTHSGGGAT KDMSASWGYG DLEQDRFNVL
GVFNYNKQQN LDANDRSFAR DYVPGRGLDQ TSGTAFPGNY SQNGNATNPL ANSNCNGPNL
VARDGLCRFS TREFIDLVPQ TEKTSFFGKT TGKLADDHNV NLEYFWSRNN NATAVGPAPL
TGLSLDSSSP YYPGNGITPA PTDFALDPTQ PVDVNWRETA AGPRESKDQN TSQRFLLSFD
GLVGGWDYNV GASYNQNKIV SSVTSGYVSD QAMIDGLASG LLNPFGPQTS AGQQYIDQAA
YHGAYSTAVG RVAGFDGRIS REIGDWFGAG PSGLALGGEY RKEKFHQDFE AFAGDIQSLG
IDPAGSVEGD RSVKAAYAEI NVPVLDSLEL SAAVRHDKYS DFGSTTNPKY SFRYQPLKEL
VVRGAYSEGF RAPSLYELYS PRSITFTQGY YNDPVLCTGG VVQPGGNGGR DCGQQFLNQI
GGNEDLAPEK ARNVTLGFVY QPVSNLSVGL DFWWIHISNQ IQPFPESTVF DQAGSYPDRF
VRNADGTLNY IVTGNANLGI VETNGVDVSL DYRFPNTPYG QFGLGLQGTY VDEYDFQSTI
KGPFTDKVGD FRGDGVIARW KHNLTGSWTF GAARAALTNR FTTGYNDYDR ETNARVASYS
VWDLSAGYTF DKVLDVDAGV KNLFDRDPPF SNQAYNFQSG YDPRYTDPLG RTLFARMTYH
F