Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3696 |
Symbol | clpX |
ID | 3715143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4184372 |
End bp | 4185655 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_349425 |
Protein GI | 77459918 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.744789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACA CCCGCAACGG CGAGGACAAC GGCAAGCTGC TCTATTGCTC CTTCTGTGGC AAAAGCCAGC ATGAAGTGCG CAAATTGATT GCCGGCCCCT CGGTCTTTAT CTGCGACGAG TGCGTCGACC TGTGCAATGA CATCATCCGC GAGGAGGTGC AGGAAGCACA GGCCGAAAGC AGCGCGCATA AATTGCCTTC GCCTAAAGAA ATCAGCGGCA TCCTTGATCA GTATGTAATT GGTCAGGAAC GTGCCAAGAA GGTTCTGGCA GTAGCGGTGT ACAACCACTA CAAGCGTCTG AACCAGCGTG ACAAAAAGGC TGACGACGTC GAACTCGGCA AGAGCAACAT CCTGCTGATC GGCCCGACAG GCTCTGGTAA AACCCTGCTG GCCGAAACCC TGGCCCGTTT GCTGAACGTT CCGTTCACCA TCGCCGACGC AACCACCCTC ACCGAGGCGG GTTATGTGGG TGAAGACGTC GAGAACATCA TTCAGAAGCT GCTGCAGAAG TGCGATTACG ATGTAGAGAA AGCCCAGATG GGGATTGTCT ATATCGACGA AATCGACAAG ATTTCCCGCA AGTCCGACAA CCCGTCGATC ACCCGAGACG TTTCCGGTGA AGGCGTGCAG CAGGCCTTGC TCAAGCTGAT CGAAGGCACG GTCGCTTCCG TTCCGCCGCA AGGTGGCCGC AAGCATCCGC AGCAGGAATT CCTTCAGGTT GATACCCGTA ACATTCTGTT CATCTGCGGT GGCGCATTCT CCGGTTTGGA GAAGGTCATT CAGAACCGTT CCACCAAGGG TGGCATCGGT TTCAACGCAG AAGTGCGCAG CAAGGAAGAG GGCAAGAAAG TCGGTGAATC CCTGCGTGAA GTCGAGCCTG ACGATCTGGT CAAGTTCGGT CTGATCCCGG AGTTCGTCGG TCGTCTGCCG GTTCTTGCGA CGCTGGACGA GCTGGATGAG GCTGCTTTGA TGCAGATTCT CACCGAGCCG AAAAATGCCC TGACCAAACA GTATGCCAAG CTGTTCGAGA TGGAAGGCGT AGATCTGGAG TTCCGTTCCG ACGCGCTGAA GTCGGTCGCC AAGCGTGCCC TGGAGCGTAA AACCGGTGCC CGTGGCCTGC GTTCGATTCT CGAAGGTGTA CTGCTCGACA CGATGTATGA AATCCCCTCG CAGTCCGAGG TGAGCAAAGT CGTGATCGAT GAAAGTGTGA TCGAAGGCAA GTCCAAGCCA CTGTATATCT ATGAAAACAG TGAGCCGGCT GCCAAGGCTG CGCCGGACGC GTAA
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Protein sequence | MTDTRNGEDN GKLLYCSFCG KSQHEVRKLI AGPSVFICDE CVDLCNDIIR EEVQEAQAES SAHKLPSPKE ISGILDQYVI GQERAKKVLA VAVYNHYKRL NQRDKKADDV ELGKSNILLI GPTGSGKTLL AETLARLLNV PFTIADATTL TEAGYVGEDV ENIIQKLLQK CDYDVEKAQM GIVYIDEIDK ISRKSDNPSI TRDVSGEGVQ QALLKLIEGT VASVPPQGGR KHPQQEFLQV DTRNILFICG GAFSGLEKVI QNRSTKGGIG FNAEVRSKEE GKKVGESLRE VEPDDLVKFG LIPEFVGRLP VLATLDELDE AALMQILTEP KNALTKQYAK LFEMEGVDLE FRSDALKSVA KRALERKTGA RGLRSILEGV LLDTMYEIPS QSEVSKVVID ESVIEGKSKP LYIYENSEPA AKAAPDA
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