Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3670 |
Symbol | |
ID | 3715116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4154512 |
End bp | 4155294 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | type 1 pili usher pathway chaperone CsuC |
Protein accession | YP_349399 |
Protein GI | 77459892 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.295639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGTTTT TCACGTCACG TTATTGGTCC GTGTGTTGCG CCGTGCTGGC GCTGGTCATG TTCGGGACGC TCAAGGCCCA GGCCGCCAGT TCGGTGCTGA TCTGGCCAAT CGATCCGGTG TTGGAGGCCG ATCAACAGGC GAGTGCGCTG TGGCTGGAAA ATCGCGGCAC GGAAACCGCC AACCTGCAGA TCCGCGTGTT CGGCTGGAGC CAGAGCGGTT TCGAAGAGCA ATACCGCAAT CAACGCGAGG TGATCGGCAG TCCGCCGGTG GCGAAGATCG AGCCGGGTCA GAAGCAACTG GTGCGCCTGA CCCGCACCAA GGATGTGCCG CCAGGCCAGG AACTGGCGTA CCGGATCATC ATCGATGAAA TCCCCTCGGC CCAGCCCCCC GTCGCCGAAG ACGGCAAGAC CGCTGCGGCG ATCCGCTTCC AGATGCGCTA CTCGGTGCCA CTGTTCGCCT ATGGCGCGGG CCTGTGGAGC AAGGAAGACA GCGCCCGTCA GCGTGACCCC AAAGGCATCG GCCTGCCGCA ACTGAGCTGG CGCACGGTGG CGGTGGAGGG CCGTCCATAT GTGGAAGTTC GCAATCAGGG CGCGGTGCAT GCGCGATTGA CCGATGTGGC CATCAAGCAG GGCAGCCAAA GCAAACCCTT GGCCGAAGGC CTGCTCGGTT ACGTGCTGCC CGGCGCAGTG ATGCGCTGGC CGGCACCGGG GCCGGTGACG GGAGAGCTGG CGGGGCGGAT CAATGGCGCG GCAAAGGTGC AGAGCATTCC GCCGGCGCGA TAG
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Protein sequence | MGFFTSRYWS VCCAVLALVM FGTLKAQAAS SVLIWPIDPV LEADQQASAL WLENRGTETA NLQIRVFGWS QSGFEEQYRN QREVIGSPPV AKIEPGQKQL VRLTRTKDVP PGQELAYRII IDEIPSAQPP VAEDGKTAAA IRFQMRYSVP LFAYGAGLWS KEDSARQRDP KGIGLPQLSW RTVAVEGRPY VEVRNQGAVH ARLTDVAIKQ GSQSKPLAEG LLGYVLPGAV MRWPAPGPVT GELAGRINGA AKVQSIPPAR
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