Gene Pfl01_3670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3670 
Symbol 
ID3715116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4154512 
End bp4155294 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content65% 
IMG OID 
Producttype 1 pili usher pathway chaperone CsuC 
Protein accessionYP_349399 
Protein GI77459892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.295639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTTTT TCACGTCACG TTATTGGTCC GTGTGTTGCG CCGTGCTGGC GCTGGTCATG 
TTCGGGACGC TCAAGGCCCA GGCCGCCAGT TCGGTGCTGA TCTGGCCAAT CGATCCGGTG
TTGGAGGCCG ATCAACAGGC GAGTGCGCTG TGGCTGGAAA ATCGCGGCAC GGAAACCGCC
AACCTGCAGA TCCGCGTGTT CGGCTGGAGC CAGAGCGGTT TCGAAGAGCA ATACCGCAAT
CAACGCGAGG TGATCGGCAG TCCGCCGGTG GCGAAGATCG AGCCGGGTCA GAAGCAACTG
GTGCGCCTGA CCCGCACCAA GGATGTGCCG CCAGGCCAGG AACTGGCGTA CCGGATCATC
ATCGATGAAA TCCCCTCGGC CCAGCCCCCC GTCGCCGAAG ACGGCAAGAC CGCTGCGGCG
ATCCGCTTCC AGATGCGCTA CTCGGTGCCA CTGTTCGCCT ATGGCGCGGG CCTGTGGAGC
AAGGAAGACA GCGCCCGTCA GCGTGACCCC AAAGGCATCG GCCTGCCGCA ACTGAGCTGG
CGCACGGTGG CGGTGGAGGG CCGTCCATAT GTGGAAGTTC GCAATCAGGG CGCGGTGCAT
GCGCGATTGA CCGATGTGGC CATCAAGCAG GGCAGCCAAA GCAAACCCTT GGCCGAAGGC
CTGCTCGGTT ACGTGCTGCC CGGCGCAGTG ATGCGCTGGC CGGCACCGGG GCCGGTGACG
GGAGAGCTGG CGGGGCGGAT CAATGGCGCG GCAAAGGTGC AGAGCATTCC GCCGGCGCGA
TAG
 
Protein sequence
MGFFTSRYWS VCCAVLALVM FGTLKAQAAS SVLIWPIDPV LEADQQASAL WLENRGTETA 
NLQIRVFGWS QSGFEEQYRN QREVIGSPPV AKIEPGQKQL VRLTRTKDVP PGQELAYRII
IDEIPSAQPP VAEDGKTAAA IRFQMRYSVP LFAYGAGLWS KEDSARQRDP KGIGLPQLSW
RTVAVEGRPY VEVRNQGAVH ARLTDVAIKQ GSQSKPLAEG LLGYVLPGAV MRWPAPGPVT
GELAGRINGA AKVQSIPPAR