Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3667 |
Symbol | |
ID | 3715113 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4150347 |
End bp | 4151099 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | transmembrane transcriptional regulator (anti-sigma-factor) |
Protein accession | YP_349396 |
Protein GI | 77459889 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000130088 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGTC TGCCCCCCAA CGAACGTGAC CTGCACGCCT ACGTCGACCA CCAGCTCAGC GAGGCCGACC GACATGTAAT GGAAACCTGG CTCGCCAGCC ATCCCGACGA GGCGGCGCAG GTTCGCGCCT GGCAACAGGA CGCCCAGCAC CTGCGCGCCG CCCTCGGCGG TGCCCTGCAA CAACCGGCCA ATCCGGACCT CGATCCGTCG CTGATCCGTC AGCGGCTCAA GCGCCAGTCG CGCCGTCAAT GGGCCAGCGC GGCGGTGCTG CTGATTGCCG TCAGCCTCGG CGGTGTCGGA GGCTGGAAGG CCCGGGACAT GACCGTGTTT CATCCCCCGG CACCGATGAC GGATGCCTTG CAGGCGTACC GTTTGATCGC CCAGCAAGGG CTTCTGCCGG CGGACTACAA GGTCGATGGT GACGGCGATA TCCAGCGCTG GCTCGACCGT TATTTCACTC AGGCCAATCG CCTGCCGGAC CTGACGTCGG CCGGTTTCGC ACCGGTCAGC GGCCGTCTGC TGAGCACCGA TGAAGGCCCG GCGGCGATGG TGATGTATGA AGACCAGAGC GGGCACAAGG TCAGCTTCTA CGTGCGCCCA CCAGGACCGA AAAATACCTT CCTGCCCCGG GGCAGCCGCC AGGACGGAGA TCTGCAGGCC GAGTACTGGT CCGGCAAGGG CTACAACTAC GCGATGGTCA GCCCGGCCGA TACCCCGGCG GCGAAAATGC TCCAGCAATC CGTGAGTTTC TAG
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Protein sequence | MISLPPNERD LHAYVDHQLS EADRHVMETW LASHPDEAAQ VRAWQQDAQH LRAALGGALQ QPANPDLDPS LIRQRLKRQS RRQWASAAVL LIAVSLGGVG GWKARDMTVF HPPAPMTDAL QAYRLIAQQG LLPADYKVDG DGDIQRWLDR YFTQANRLPD LTSAGFAPVS GRLLSTDEGP AAMVMYEDQS GHKVSFYVRP PGPKNTFLPR GSRQDGDLQA EYWSGKGYNY AMVSPADTPA AKMLQQSVSF
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