Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3663 |
Symbol | |
ID | 3715109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4146834 |
End bp | 4148042 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_349392 |
Protein GI | 77459885 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000185127 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.242183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACTG CAACATTCGA TAAAGATGTC GTGCTGCTTT TCGCCATCGC CTGCGGCCTC GCGGTGGGCA ACGTGTATTA CGCCCAGCCG CTGCTGGATG CAATGGCCGA CGCCTTCGGC CTGTCGCCGG GCAGCATCGG CATCGTCATG ACGTTGACTC AGGTCGGCTA CGGCCTCGGG CTGTTGTTGC TCGTGCCCCT TGGCGACCTG CTCAACCGCC GGCGGCTGAT CGTCACGCAA ACGCTGTTGT CCGCCGCTGC CTTGCTGATG ATCGCCTTGG CCTCGAACAG CGTCTGGCTA CTGATCGGCG TCACCCTGAC CGGCCTGCTG GCCGTGGTCA CCCAGGTGTT GGTCGCCTAC GCCGCAACCC TGGCCGTCCC GGCGCAACGC GGAAAGGTTG TGGGCGTGAT CACCAGCGGC ATCGTCATCG GCATTCTGCT GGCGCGCACG GTGGCCGGCG GTATGGCTGA TCTGGCCGGC TGGCGCTCGA TCTATCTGCT GTCAGCGGGA TTGACGCTGG TGATGGCTGT GTTGCTGTTT CGGGTGTTAC CCAAGGATGA AGAAGCACGA CCATCCACGC ATTACGTGGC ATTGATTGCC TCAGTGTTCA GCCTGTTTCG TGAAGAACCG GTGCTGCGCC AACGTGCGAT CCTCGCCCTG CTCACCTTCG CCAGCGCCAT GGTGCTGTGG ACGCCGATGG TGTTACCGCT GGCCGCCCCG CCGCTGTCGC TTTCCCACAG TGAAATCGGA TTGTTCGGAC TCGCCGGCGC GGCGGGTGCA CTCGCCGCCG CCAGAGCCGG ACACCTGGCG GATCGAGGAT TGGGGCAATG GGTAAGCGGT CTGTCGCTGC TGCTGATGCT CGGTTCGTGG TTGCCGATCG CACTGACCCA GTCTTCGTTG TGGGCGTTGC TGCTTGGCGT CATCACCCTG GATCTGGGCT TGCAGGCCGT GCACGTCACC AGCCAGAGCC TGATCTACAG CGTCCGCCCA GAGGCACAAA GCCGACTGAC TGCCGGCTAC ATGCTGTTTT ATTCAATGGG CAGCGCCTTG GGCTCAATCG CCTCGACCGC CATGTACGCC TGGGCAGGAT GGCCGGGCGT CTGCTGGCTG GGTGCCGCAA TCAACGTGGT CGCGCTGCTG TACTGGTGGC GAACGCTGGC CACCCGGAAA CGTGGCGAGG CTGCTTGCGC CCTCGCCACG TCGGACTGA
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Protein sequence | MKTATFDKDV VLLFAIACGL AVGNVYYAQP LLDAMADAFG LSPGSIGIVM TLTQVGYGLG LLLLVPLGDL LNRRRLIVTQ TLLSAAALLM IALASNSVWL LIGVTLTGLL AVVTQVLVAY AATLAVPAQR GKVVGVITSG IVIGILLART VAGGMADLAG WRSIYLLSAG LTLVMAVLLF RVLPKDEEAR PSTHYVALIA SVFSLFREEP VLRQRAILAL LTFASAMVLW TPMVLPLAAP PLSLSHSEIG LFGLAGAAGA LAAARAGHLA DRGLGQWVSG LSLLLMLGSW LPIALTQSSL WALLLGVITL DLGLQAVHVT SQSLIYSVRP EAQSRLTAGY MLFYSMGSAL GSIASTAMYA WAGWPGVCWL GAAINVVALL YWWRTLATRK RGEAACALAT SD
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