Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3652 |
Symbol | |
ID | 3715079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4133482 |
End bp | 4134426 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | LysR family transcriptional regulator |
Protein accession | YP_349381 |
Protein GI | 77459874 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0641656 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGA GCAAGGTCGA CCTCAACCTT TTCATCGTCT TCGACGCGAT CTATACCGAA GCCAACCTGA CACGCGCCGG GCAGATTGTC GGCATTACCC AGCCTGCGGT GTCCAACGCA TTGGCGCGGT TGCGCGAGAC CTTCAACGAC CCGCTCTTCG TCCGCACCGC TCAGGGCATG GTGCCGACGC CCATGGCGCA GAACATCATC GGTCCGGTGC GCAACGCGCT GTCGCTGCTG CGGGTGTCGG TTCAGGAAAG CCGCATTTTC AACCCTTCGC AAGCGGTCAA GACCTACCGC ATCAGCATGA CTGACCTGAC CGAAGCGGTG ATTCTGCCGC CGCTGTTCCA GCGTCTGCGT CGTCTGGCGC CGACTGTGAT CATCGAAAGC TTTCTGTCCA AACGCCGGGA AACCACCAAG GAGCTGGCTG CCGGGCGTCT CGACTTTGCC GTGGATGCGC CGCTCAACAC CGACCCGCAG GTGCGCCACG TCAAGCTGAT GGAAGACCGT TACGTCTGCG CGATGCGCAA GGGTCATCCG CTGGCGACCA AGGAAAAATT CACCCTCGAC GATTACCTGT CGCTGACCCA CATTCATATT TCCAGCCGGC GCAGTGGTCT GGGCCATGTC GATCTGGCGC TGGGCAAAAT GGGCATCCAG CGCAAGATCG CCCTGCGCTC GCAGCACTAT TTGATGGCGT CTCAGGTGTT GCAGCAGACT GATATGGTAA TGACCGTGCC GGAGCGCTTC GCCCGTCGGC ATGACCTGCA TGCGTTCAAT CTGCCGGTCA ACGATGTGCC GCCGGTGGAA ACCCATTTGT ACTGGCACGA AAGCACCGAT CAGGACCCGG CCAACCGCTG GATGCGCGAG CAGATGATCG AGTTGTGCCA GCAAGTGACA GCCCACGAGA AGAAGCTCGA CAAGCTGCAG GCGCCCGCCA CTTGA
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Protein sequence | MNLSKVDLNL FIVFDAIYTE ANLTRAGQIV GITQPAVSNA LARLRETFND PLFVRTAQGM VPTPMAQNII GPVRNALSLL RVSVQESRIF NPSQAVKTYR ISMTDLTEAV ILPPLFQRLR RLAPTVIIES FLSKRRETTK ELAAGRLDFA VDAPLNTDPQ VRHVKLMEDR YVCAMRKGHP LATKEKFTLD DYLSLTHIHI SSRRSGLGHV DLALGKMGIQ RKIALRSQHY LMASQVLQQT DMVMTVPERF ARRHDLHAFN LPVNDVPPVE THLYWHESTD QDPANRWMRE QMIELCQQVT AHEKKLDKLQ APAT
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