| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3607 |
|---|
| Symbol | |
|---|
| ID | 3714995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4076417 |
|---|
| End bp | 4077772 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | NADH dehydrogenase I subunit F |
|---|
| Protein accession | YP_349336 |
|---|
| Protein GI | 77459829 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTGA CTTCTTTCGG TCCGGCCAAC CGCATCCAGC GTTCGGCCGA GACTCACCCG
CTGACCTGGC GCCTGCGTGA CGACGGCGAA GCCGTGTGGC TCGACGAGTA CCAGGCCAAG
AACGGTTACG CCGCTGCGCG CAAAGCCTTC GCCGACATGG ATCAGGACGC CATCGTCCAG
ACCGTGAAAG ACGCCGGCCT CAAAGGTCGC GGCGGTGCAG GCTTCCCCAC AGGCGTGAAG
TGGGGCCTGA TGCCAAAGGA CGAATCCATC AACATCCGCT ACCTGCTGTG CAACGCGGAT
GAAATGGAGC CGAACACCTG GAAAGACCGC ATGCTGATGG AGCAACTGCC CCATCTGCTG
ATCGAAGGCA TGCTGATCAG CGCCCGCGCG CTGAAAACCT ACCGTGGCTA CATCTTCCTG
CGTGGCGAAT ACACCACCGC CGCCAAGCAC CTGAACCGTG CCGTGGAAGA AGCCAAGGCA
GCCGGCCTGC TGGGCAAGAA CATCCTGGGC AGCGGCTTCG ATTTCGAGCT GTTCGTCCAC
ACCGGCGCCG GGCGTTACAT CTGCGGCGAA GAAACCGCAC TGATCAACTC CCTCGAAGGC
CGCCGCGCCA ACCCGCGCTC CAAACCGCCC TTCCCTGCCG CCGTCGGCGT GTGGGGCAAG
CCGACCTGCG TGAACAACGT TGAAACCCTG TGCAACGTGC CGGCGATCAT TGCCGACGGC
GTGGACTGGT ACAAATCGTT GGCCCGCGAC GGCAGCGAAG ACATGGGCAC CAAGCTCATG
GGCTTCTCCG GCAAGGTCAA GAACCCCGGC CTGTGGGAAC TGCCATTCGG CGTGACCGGC
CGCGAGCTGT TCGAAGACTA CGCCGGCGGC ATGCGCGACG GCTTCAAGCT GAAAGCCTGG
CAGCCAGGTG GCGCCGGTAC CGGTTTCCTG TTGCCGGAAC ACCTCGACGC ACAAATGTAC
GCTGGCGGCA TCGCCAAGGT TGGCACCCGT ATGGGTACCG GCCTGGCCAT GGCGGTGGAC
GACAGCGTCA ACATGGTGTC CCTGCTGCGC AACATGGAGC AGTTCTTCGC TCGCGAATCC
TGTGGTTTCT GCACCCCTTG CCGTGATGGT TTGCCATGGA GCGTCAAGCT GCTGATGGCC
ATCGAACAAG GCCGCGGCCA GCCAGGCGAC ATCGAGACCC TGCTGGGTCT GGTCAACTTC
CTCGGCCCGG GCAAGACCTT CTGTGCTCAC GCACCGGGTG CCGTGGAGCC GTTGGGCAGT
GCCATCAAAT ACTTCCGTCC AGAGTTCGAA GCCGGTATCG CGCCTGCAAG CGCCGCCGTC
CCGCCTCTGG CGAAGCCGAT CGTAGTCGGC GCGTAA
|
|---|
| Protein sequence | MTLTSFGPAN RIQRSAETHP LTWRLRDDGE AVWLDEYQAK NGYAAARKAF ADMDQDAIVQ
TVKDAGLKGR GGAGFPTGVK WGLMPKDESI NIRYLLCNAD EMEPNTWKDR MLMEQLPHLL
IEGMLISARA LKTYRGYIFL RGEYTTAAKH LNRAVEEAKA AGLLGKNILG SGFDFELFVH
TGAGRYICGE ETALINSLEG RRANPRSKPP FPAAVGVWGK PTCVNNVETL CNVPAIIADG
VDWYKSLARD GSEDMGTKLM GFSGKVKNPG LWELPFGVTG RELFEDYAGG MRDGFKLKAW
QPGGAGTGFL LPEHLDAQMY AGGIAKVGTR MGTGLAMAVD DSVNMVSLLR NMEQFFARES
CGFCTPCRDG LPWSVKLLMA IEQGRGQPGD IETLLGLVNF LGPGKTFCAH APGAVEPLGS
AIKYFRPEFE AGIAPASAAV PPLAKPIVVG A
|
|---|
| |