| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3585 |
|---|
| Symbol | lolA |
|---|
| ID | 3714973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4050811 |
|---|
| End bp | 4051431 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | outer-membrane lipoprotein carrier protein |
|---|
| Protein accession | YP_349314 |
|---|
| Protein GI | 77459807 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.151832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.744864 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTTA TCCGCATGTT GCTGCCGGTA CTGGCTCTGA CCACCCTCAC GGCTCACGCC
GATGACAAGG ATGTGGCTCG CCTGACCCAA TTGCTCGAAA CATCCAAGAC CCTGACCGCC
AATTTTTCCC AGTTGACCCT CGACGGCAGC GGCACCCAGT TGCAGGAAAC CACCGGCGAC
ATGACCCTGC AGCGTCCGGG CCTGTTCTAC TGGCACACCA ATGCGCCAGC CGAGCAGACC
ATGGTGTCCG ACGGCAAGAA AGTCACGCTG TGGGACCCGG ACCTGGAACA GGCCACCATC
AAGAAGCTTG ATGAGCGTCT GACCCAGACC CCGGCGCTGT TGCTGTCTGG CGACGTATCG
AAGATCAGTC AGAGCTTTGA CATCACCGCG AAAGAGGCCG GTGGCGTGAT CGACTTCACC
CTGAAGCCGA AAACCAAGGA CACGCTGTTC GACAGCCTGC GCCTGTCGTT CCGCAACGGT
CTGGTCAATG ACATGCAACT GATCGACAGC GTCGGCCAGC GCACCAACAT CCTGTTTACC
GGTGTGAAGG CCAACGAAGC GGTCCCGGCC TCGAAGTTCA AGTTCGACAT CCCCAAGGGT
GCCGATGTGA TCCAGGAATA A
|
|---|
| Protein sequence | MRLIRMLLPV LALTTLTAHA DDKDVARLTQ LLETSKTLTA NFSQLTLDGS GTQLQETTGD
MTLQRPGLFY WHTNAPAEQT MVSDGKKVTL WDPDLEQATI KKLDERLTQT PALLLSGDVS
KISQSFDITA KEAGGVIDFT LKPKTKDTLF DSLRLSFRNG LVNDMQLIDS VGQRTNILFT
GVKANEAVPA SKFKFDIPKG ADVIQE
|
|---|
| |