Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3582 |
Symbol | |
ID | 3714567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4047794 |
End bp | 4049074 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | seryl-tRNA synthetase |
Protein accession | YP_349311 |
Protein GI | 77459804 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0780205 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.476935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATT CCAAACTGTT ACGTAGCAAC CTTCAGGACG TAGCGGACCG CCTGGCTTCC CGTGGCTTTG CCCTGGATGT CGCGCGCATC GAAGCGCTGG AAGAACAGCG CAAGACCGTC CAGACCCGCA CCGAAGCACT GCAGGCTGAG CGTAACGCGC GTTCCAAGTC CATCGGTCAG GCCAAGCAGC GCGGCGAAGA CATCGCGCCG CTGATGGCGG ACGTCGAGCG CATGGCGGGC GAACTGAGCG CCGGTAAAGT CGAGCTGGAA GCGATCCAGA CCGAACTGGA TTCGATCCTG CTGGGCATCC CGAACCTGCC GCACGAATCG GTGCCGGTCG GTGAAGACGA AGACGGCAAC GTTGAAGTCC GCCGTTGGGG CACGCCGACC GCGTTCGATT TCCCGGTTCA GGATCACGTG GCCCTGGGCG AGAAGTTCGG CTGGCTCGAC TTCGAAACCG CCGCCAAGCT GTCCGGCGCA CGCTTTGCAC TGCTGCGCGG CCCGATTGCC CGCCTGCACC GCGCACTGGC GCAGTTCATG ATCAACCTGC ACGTCACCGA GCACGGCTAC GAAGAGGCCT ACACGCCTTA TCTGGTTCAG GCTCCGGCGC TGCAAGGCAC CGGTCAATTG CCGAAGTTCG AAGAAGACCT GTTCAAGATC GCTCGCGAAG GCGAAGCCGA TCTGTACCTG ATCCCGACCG CCGAAGTGTC GCTGACCAAC ATCGTGGCTG GTGAAATCGT CGATTCGAAA CAGCTGCCGA TCAAGTTCGT CGCTCACACT CCGTGCTTCC GCAGCGAAGC CGGCGCGTCG GGTCGTGACA CTCGCGGCAT GATCCGTCAG CACCAGTTCG ACAAAGTTGA AATGGTCCAG ATCGTCGAGC CGTCGAAGTC GATGGAAGCG CTGGAAAGCC TCACCGCCAA CGCCGAGAAA GTTCTGCAAC TGCTGGGTCT GCCTTACCGT ACCCTGGCGC TGTGCACCGG CGACATGGGC TTCAGCGCGG TCAAGACTTA CGACCTTGAA GTGTGGATCC CGAGCCAGGA CAAATACCGC GAAATCTCGT CGTGCTCCAA CTGCGGCGAC TTCCAGGCCC GCCGCATGCA GGCGCGTTTC CGCAATCCGG AAACCGGCAA GCCCGAGCTG GTGCACACCC TGAACGGTTC CGGTCTGGCA GTCGGTCGTA CCCTGGTGGC CGTGCTGGAA AACTACCAGC AGGCCGACGG TTCGATCCGT GTGCCGGACG TGCTGAAGCC GTACATGGGT GGCCTTGAGG TCATCGGTTA A
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Protein sequence | MLDSKLLRSN LQDVADRLAS RGFALDVARI EALEEQRKTV QTRTEALQAE RNARSKSIGQ AKQRGEDIAP LMADVERMAG ELSAGKVELE AIQTELDSIL LGIPNLPHES VPVGEDEDGN VEVRRWGTPT AFDFPVQDHV ALGEKFGWLD FETAAKLSGA RFALLRGPIA RLHRALAQFM INLHVTEHGY EEAYTPYLVQ APALQGTGQL PKFEEDLFKI AREGEADLYL IPTAEVSLTN IVAGEIVDSK QLPIKFVAHT PCFRSEAGAS GRDTRGMIRQ HQFDKVEMVQ IVEPSKSMEA LESLTANAEK VLQLLGLPYR TLALCTGDMG FSAVKTYDLE VWIPSQDKYR EISSCSNCGD FQARRMQARF RNPETGKPEL VHTLNGSGLA VGRTLVAVLE NYQQADGSIR VPDVLKPYMG GLEVIG
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