| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3581 |
|---|
| Symbol | |
|---|
| ID | 3714566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4046399 |
|---|
| End bp | 4047793 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | precorrin-2 dehydrogenase / uroporphyrinogen-III C-methyltransferase |
|---|
| Protein accession | YP_349310 |
|---|
| Protein GI | 77459803 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.249196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.492888 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATATC TGCCGCTGTT TCACAACCTG CGCGGCAGTC GTGTGTTGGT TGTTGGTGGG
GGGGAGATTG CCTTGCGCAA GTCCCGCCTG CTGGCCGATG CCGGTGCGCT GCTGCGGGTG
GTCGCACCTG AAATCGAAGC GCAACTGCGC GAACTGGTTG CCGCCAGCGG TGGCGAATGC
CTGCTGCGTG GCTACGCCGA AGCGGATCTG GACGGTTGTG GGCTGATCAT TGCCGCCACC
GACGACGAAG CGTTGAACGC GCACGTCTCC GCCGATGCCC ACCGGCGCTG CGTGCCGGTC
AATGTGGTCG ATGCGCCGGC GCTGTGCAGC GTGATCTTCC CGGCAATCGT CGATCGTTCA
CCGCTGATCA TCGCGGTCTC CAGCGGCGGC GATGCGCCGG TGCTGGCCCG GCTGATCCGC
GCCAAGATCG AAACCTGGAT TCCTTCGACC TACGGCCATC TGGCCGGTCT GGCCGCGCGG
TTTCGTGATC AGGTCAAAGG CCTGTTTCCT GATGTGCAGC AGCGTCGCGG TTTTTGGGAA
GACGTGTTTC AGGGGCCGAT TGCCGACCGG CAGCTGGCAG GACAGGGCGC CGAAGCCGAA
CGTTTGCTGC AAGCCAAGAT TGACGGCGAA GCCATGGTCA CGACCGGTGA GGTGTATCTG
GTTGGGGCAG GACCTGGTGA TCCGGATCTG CTGACCTTCC GCGCCTTGCG TCTGATGCAG
CAAGCCGACG TGGTGCTGTA CGACCGCTTG GTGGCTCCGG CGATTCTTGA GCTGTGCCGT
CGCGATGCCG AGCGGGTCTA CGTCGGCAAG CGTCGCGCCG ATCACGCCGT GCCGCAGGAT
CAAATCAACC AGCAACTGGT GGATCTGGCC AAGGCCGGCA AGCGTGTGGT GCGGTTGAAG
GGCGGGGATC CGTTCATCTT CGGCCGTGGC GGCGAAGAGA TCGAGGAACT GGCGGCCCAT
GGCATCCCGT TTCAAGTGGT GCCGGGCATC ACGGCGGCCA GCGGTTGCGC GGCGTATGCC
GGGATTCCGC TGACTCATCG CGACTACGCT CAGTCGGTGC GTTTCGTCAC CGGGCACTTG
AAGGACGGTT CGACCGATCT GCCGTGGTCG GATCTCGTCG CTCCGGCTCA GACGCTGGTG
TTCTACATGG GGTTGGTGGG GCTGCCGATC ATTTGCGAGC AGTTGATCAA ACATGGTCGT
GCGGCCGAAA CGCCGGCCGC GCTGATCCAG CAGGGCACCA CGGTCAATCA ACGGGTCTTC
ACCGGCACGC TGGCTGACCT GCCACGTCTG GTGGCGGAGC ATGAAGTGCA TGCGCCGACG
CTGGTGATCG TCGGCGAAGT GGTGCAACTG CGCGAGAAAC TTGCGTGGTT CGAGGGCGCT
CAGGGTCAAA TCTGA
|
|---|
| Protein sequence | MKYLPLFHNL RGSRVLVVGG GEIALRKSRL LADAGALLRV VAPEIEAQLR ELVAASGGEC
LLRGYAEADL DGCGLIIAAT DDEALNAHVS ADAHRRCVPV NVVDAPALCS VIFPAIVDRS
PLIIAVSSGG DAPVLARLIR AKIETWIPST YGHLAGLAAR FRDQVKGLFP DVQQRRGFWE
DVFQGPIADR QLAGQGAEAE RLLQAKIDGE AMVTTGEVYL VGAGPGDPDL LTFRALRLMQ
QADVVLYDRL VAPAILELCR RDAERVYVGK RRADHAVPQD QINQQLVDLA KAGKRVVRLK
GGDPFIFGRG GEEIEELAAH GIPFQVVPGI TAASGCAAYA GIPLTHRDYA QSVRFVTGHL
KDGSTDLPWS DLVAPAQTLV FYMGLVGLPI ICEQLIKHGR AAETPAALIQ QGTTVNQRVF
TGTLADLPRL VAEHEVHAPT LVIVGEVVQL REKLAWFEGA QGQI
|
|---|
| |