Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3568 |
Symbol | |
ID | 3714553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4038219 |
End bp | 4039280 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | glycosyl hydrolase family chitinase |
Protein accession | YP_349297 |
Protein GI | 77459790 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.285696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAACA TCGACTTCAC CCTATTGAAA AACCAGGCCA GCGACGCGGC GTCGCTGATG CCGAGCCTTG CCGGCAAGAA GATCCTCATG GGCTTCTGGC ACAACTGGCC GGCCGGCCCG AGCGATGGTT ACCAGCGCGG CCAGTTCGCC AACATCGCCC TGGAAAACGT GCCGAAGGAG TACAACGTGG TCGCGGTGGC CTTCATGAAG GGCAGCGGGA TTCCGACCTT CAAGCCGTTC AACGTCTCCG ATGCCGAGTT CCGCCGTCAG GTCGGCGTGC TCAACAGTCA GGGGCGGGCC GTGCTGATTT CCCTGGGCGG TGCCGATGCG CACATCGAGT TGCGCGCCGG CCAGGAGCAA CCACTGGCCA ATGAAATCAT CCGTCTGGTG GAAACCTACG GTTTTGATGG CCTGGACATC GATCTTGAAC AGAGCGCGAT TGATTTCGCC GCCAACAAGA CCGTCCTGCC AGCCGCGCTG AAACTGGTCA AGGATCACTA CGCCGGCCAA GGCAAGCATT TCATCATCAG CATGGCGCCG GAGTTCCCGT ACCTGACCAC CTCCGGCAAA TACGTCGGTT ATCTGCAGGC GCTGGAAGGC TATTACGACT TCATCGCTCC GCAGTTCTAC AACCAGGGCG GCGACGGGGT CTGGGTGCCG GAGGCCAATA ACGGCAACGG GGCGTGGATC GCCCAGAACA ACGACACGAT GAAAGAAGAC TTCCTCTATT ACCTGACCGA GAGCCTGGTC ACCGGCACTC GCGGTTTTAC GAAGATCCCG GCGGACAAGT TCGTCATCGG CCTGCCGGCC AACGTCGATG CCGCCGCCAC CGGTTACGTG ATCGACAAAA CCGTGGTCGG CAACGCGATG AAACGCCTGG CGGTCAAAGG GCATCCGATC AAGGGCCTGA TGACCTGGTC GGTGAACTGG GACAACGGCA CCAGCAAGGA TCGCGTGCCG TACGACTGGG AATTCAGTCG GCGTTACGGA CCGCTGATTC ACGGGGCGCC GTCTGCGGTG CAGGGCGCTG ATGCCGCAAC GGTGAGCGTC GCTCATCAGT AG
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Protein sequence | MSNIDFTLLK NQASDAASLM PSLAGKKILM GFWHNWPAGP SDGYQRGQFA NIALENVPKE YNVVAVAFMK GSGIPTFKPF NVSDAEFRRQ VGVLNSQGRA VLISLGGADA HIELRAGQEQ PLANEIIRLV ETYGFDGLDI DLEQSAIDFA ANKTVLPAAL KLVKDHYAGQ GKHFIISMAP EFPYLTTSGK YVGYLQALEG YYDFIAPQFY NQGGDGVWVP EANNGNGAWI AQNNDTMKED FLYYLTESLV TGTRGFTKIP ADKFVIGLPA NVDAAATGYV IDKTVVGNAM KRLAVKGHPI KGLMTWSVNW DNGTSKDRVP YDWEFSRRYG PLIHGAPSAV QGADAATVSV AHQ
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