Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3565 |
Symbol | |
ID | 3713884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4035147 |
End bp | 4036874 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | gamma-glutamyltransferase 1 |
Protein accession | YP_349294 |
Protein GI | 77459787 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.297566 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTACG AACCTTTTGC CAAATCGCTG ATTGCGACCT CGTTGGCGCT CAGCTGCCTC ATGGCGCACG CCGCCTCGGT TGCCCCGGTT GCTGCCGAAA ACGGCATGGT GGTCACCGCC CAGCACCTGG CCACCCACGT GGGTGTCGAC GTGTTGAAAA GTGGCGGCAA CGCGGTGGAT GCGGCGGTCG CCGTGGGTTA TGCACTGGCG GTGGTTTACC CGGCGGCGGG CAACCTCGGT GGCGGTGGTT TCATGACCAT TCAACTGGCG GACGGACGCA AGACCTTCCT CGATTTCCGC GAAAAAGCCC CGCTGGCCGC GACGGCCAAC ATGTATCTCG ACAAGGACGG CAACGTCATT CCGGATCTGA GTACCCGTGG TCACCTCGCG GTCGGCGTTC CGGGCACCGT GTCCGGCATG GAGCTGGCGC TGAGCAAGTA CGGCACCAAG CCGCGCAAGG ACATGATCGC CCCAGCGATC AAACTGGCGG AAGAAGGTTT CGAGCTGGAA CAGGGCGACG TCGAGCTTCT GGAGTACGCG ACCGACGTAT TCAAGAAGGA CATCAAGGAT TCCGGCGCGA TCTTTTTGAG CAACGGCGAG CCGATGCAGG TCGGGCAGAA ACTGGTGCAG AAGGATCTGG GCAAAACCCT GCGCACCATT TCCGAAAAAG GCGCCGACGG CTTCTACAAA GGCTGGGTGG CCGACGCCAT CGTCACCTCC AGTCAGGCCA ACAAGGGCAT CATCACCCAG GCCGACCTCG ACAAGTACAA GACCCGCGAA CTGGCCCCGG TGGAGTGCGA CTATCGCGGT TATCACGTGG TATCGGCACC GCCGCCAAGC TCCGGCGGCG TCGTGATCTG CCAGATCATG AACATTCTCG AAGGCTATCC GATGAAGGAT CTGGGCTTCC ATTCTGCCCA GGGCATGCAC TACCAGATCG AGGCGATGCG TCACGCATAC GTGGATCGCA ACAGTTATCT GGGCGACCCG GATTTCGTGA AAAACCCGAT CGAACACCTG CTGGACAAGA ACTACGCGAC CAAGCTGCGT GACGCGATCC AGCCGCAGAA GGCCGGCGTT TCGGCGGAAC TCAAGCCCGG CGTCGCGCCT CATGAAGGCA GCAACACCAC GCACTACTCG ATCGTCGACA AATGGGGCAA CGCGGTCTCG GTCACCTACA CCCTCAACGA CTGGTTCGGC GCCGGTGTGA TGGCGAGCAA GACCGGGGTG ATCCTCAACG ATGAAATGGA CGACTTCACC TCCAAGGTCG GCGTGCCGAA CATGTACGGT CTGGTGCAGG GTGAGGCCAA CGCCATTGCT CCGGGCAAGG CGCCGCTGTC CTCGATGAGC CCGACTATCG TCACCAAGGA CGGCAAAGTG GTGATGGTGG TCGGTACGCC GGGCGGCAGT CGCATCATTA CCGCGACGTT GCTGACCATG CTCAACGTCA TCGACTACGG CATGGGCCTG CAGGAAGCGG TCGACGCTCC ACGTTTCCAC CAGCAGTGGA TGCCGGAGGA AACCAACCTC GAAGACTTCG CCGCCAGCCC CGACACCAAG AAGATTCTCG AGAGCTGGGG CCACAAGTTC GCGGGCCCGC AGGACGCCAA CCACATCGCC GCGATTCTGG TTGGTGCACC GTCGTTGGGT GGCAAACCGG TCGGCAAGAA CCGCTTCTAC GGCGCCAACG ATCCACGGCG CAACACCGGG TTGTCATTGG GTTACTGA
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Protein sequence | MKYEPFAKSL IATSLALSCL MAHAASVAPV AAENGMVVTA QHLATHVGVD VLKSGGNAVD AAVAVGYALA VVYPAAGNLG GGGFMTIQLA DGRKTFLDFR EKAPLAATAN MYLDKDGNVI PDLSTRGHLA VGVPGTVSGM ELALSKYGTK PRKDMIAPAI KLAEEGFELE QGDVELLEYA TDVFKKDIKD SGAIFLSNGE PMQVGQKLVQ KDLGKTLRTI SEKGADGFYK GWVADAIVTS SQANKGIITQ ADLDKYKTRE LAPVECDYRG YHVVSAPPPS SGGVVICQIM NILEGYPMKD LGFHSAQGMH YQIEAMRHAY VDRNSYLGDP DFVKNPIEHL LDKNYATKLR DAIQPQKAGV SAELKPGVAP HEGSNTTHYS IVDKWGNAVS VTYTLNDWFG AGVMASKTGV ILNDEMDDFT SKVGVPNMYG LVQGEANAIA PGKAPLSSMS PTIVTKDGKV VMVVGTPGGS RIITATLLTM LNVIDYGMGL QEAVDAPRFH QQWMPEETNL EDFAASPDTK KILESWGHKF AGPQDANHIA AILVGAPSLG GKPVGKNRFY GANDPRRNTG LSLGY
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