Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3532 |
Symbol | |
ID | 3713832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4009794 |
End bp | 4010897 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | extracellular solute-binding protein |
Protein accession | YP_349261 |
Protein GI | 77459754 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.50188 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGGTC ATCGTGGGTA TATCAACCTG GGTCTGATGG GCGTTTTGTC CGCTGCGCTG AGTGCGCAGG CGGCCGATGC GCCGAGCGTG CATGTCTATA ACTGGTACGA CTACATCGGC CTTAACACCC TGCATGACTT CAAGCGTGAC AGCGGTATCG AACCGGTCTA CGACACCTTC GACAGCGCCG AAGTGCTGGA AGGCAAACTG ATGACCAGCC GCAGCGGCTA CGACGTGGTG GTGGCGAGCA ACTTCAGCCT GCCGACCCTG ATCAAGGCCG GCGCCCTCGC CCCGCTGCCC CGCGACCAAC TGCCGGGCTG GAAGAACCTC GACAACGATC TGCTGAGCAA GCTGGCCAAC AACGACCCCG GCAACCAATA CGCCGTGCCT TACCTGTGGG GCACCAACGG CATCGGCTAC AACGTCGACA AGGTGCGCGC CGTGCTGGGC GAAAAGGCCC CGGTGGATTC CTGGGATCTG GTGTTCAAGG AAGAGAACCT GGCCAAACTC GGCGAATGCG GCGTGGCGAT GCTCGATTCG CCGTCGGAAA TGCTCCCGGT CGCGCTGCAT TATCTCGGCC TGCCGCCCAA CAGCACCAAC GCCGAGGACT ATCAGAAAGC CGAAGCACTG CTGCTGAAAC TGCGCCCGCA CATTGCCTAC TTCAATTCCT CGAAATTCAT CAGCGATCTG TCCAACGGCA ACATTTGCGT GGCGGTCGGC TGGTCCGGCG CGATGCTCGA AGCCAAGTCC ACCGCCGAGC AGGCCGGCAA CGGCGTGAAG ATCCGGTACA GCCTGCCCAA GGAAGGCGCG CCAGTGTGGT TCGACACGCT GGTCTTGCTC AAGGACGCAC CGCATCCGGC CCAAGGCCTG GCGTTCATCG ACTACCTGCT GCGGCCCGAT GTGATTGCGC CGGTCAGCGA TCACTTGTCC TACCCCAACG GCAATCGAGC CGCGACGGCG CTGGTCGCCC AGACCACCCG CGACAACCCG GCGGTGTACC CGTCAGCCAC GGCGATGGCC ACGTTGTACA CCCTCGAGCC CTTGCCCAAA GCCACCGAAC GGGTGCGCAC GCGGGTGTGG AGCAAGGTCA AGAACGGCCA GTAA
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Protein sequence | MRGHRGYINL GLMGVLSAAL SAQAADAPSV HVYNWYDYIG LNTLHDFKRD SGIEPVYDTF DSAEVLEGKL MTSRSGYDVV VASNFSLPTL IKAGALAPLP RDQLPGWKNL DNDLLSKLAN NDPGNQYAVP YLWGTNGIGY NVDKVRAVLG EKAPVDSWDL VFKEENLAKL GECGVAMLDS PSEMLPVALH YLGLPPNSTN AEDYQKAEAL LLKLRPHIAY FNSSKFISDL SNGNICVAVG WSGAMLEAKS TAEQAGNGVK IRYSLPKEGA PVWFDTLVLL KDAPHPAQGL AFIDYLLRPD VIAPVSDHLS YPNGNRAATA LVAQTTRDNP AVYPSATAMA TLYTLEPLPK ATERVRTRVW SKVKNGQ
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