| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3508 |
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| Symbol | |
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| ID | 3713731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 3986889 |
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| End bp | 3987965 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | diguanylate cyclase |
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| Protein accession | YP_349237 |
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| Protein GI | 77459730 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00123099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.413 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCAAC TCTGGATCAG CTTCGCCATT GTCGTTGTGC TGTTGGTCGT GATCGCCGTT
CTGATCCGCC GAGTGCGCGC GCTTCGTCAG CAACTCGCCG AGTATCGCGA ACTGCTCACC
CGCGCCGCCG AGGGCCAGAA CATCCGTCAG GATGGCGACG CCGACCGCTT CAAGCGCAGC
CAGTATTTTG CGCGGATCGG CACTTGGGAT TGGGAAGTCG ACACGGATCG ACTCTATTGG
TCCGACGCAA TATTCGGCAT GTTCGGCTTC AAGATCGGCG AAGTGACGCC CTCCTATGCG
CTGTTCTGTT CCTGCGTACA CCCCGATGAC CGCGCCAGGG TGCGCGCGGG GGAATTGCGA
TGCCTGGAGA CTGGTGAAAA CCATGATGAG GAATACCGCG TGGTCTGGCC CGACGGCACA
ATCCGCTGGT TGCGGGAAAC CGGCAATGTG GTGCGCAACG ATCACGACGC GGTGATCAAG
ATGATGGGTG TAGTACGCGA CATCACCGAA GAAAAGGCCT CGGCCAGCTA CCTCCAGCAC
CTCGCTCATT TCGACCCGTT GACCGGCCTG CCCAACCGCC TGGTGCTGGA AGAACGGCTA
TCGGAAGCAC TGGAACATGC GCGCATGACC GAGACGCGGG TGGCGTTGGT GTTTATCGAT
CTCAACGGCT TCAAAGCGAT CAACGACCGC TACGGTCACG CCGCCGGCGA CCGTGTTCTG
ATCACCACCG CCACGCGCCT GAAACGCATC CTTCGGGTCA GCGATACCGT CGCGCGCATC
GGCGGCGATG AATTCGTGGT CATCCTGCAA GGCCTCGCCC CCGGTCTGAA CCTGCAGGAC
GAAGCGCGCA GCATCTGCCA GAAAATCTTC ATCGAACTGT CCCCGCCAAT CCCCATCGGC
AATGAACAAC GCCACATCGG CACCAGCCTC GGCGTCGCCG TATTTCCCGA CCACGCACCG
ACCATGGACC GGTTGCTGCA CATTGCGGAT CTGGCGATGT ACGAGGCCAA GCGCAGTGGG
AACAATCAGT ATCGGTTGGG CGGCGGGCAG ACGCTGAGTC ATGGCCGGGC TGATTGA
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| Protein sequence | MTQLWISFAI VVVLLVVIAV LIRRVRALRQ QLAEYRELLT RAAEGQNIRQ DGDADRFKRS
QYFARIGTWD WEVDTDRLYW SDAIFGMFGF KIGEVTPSYA LFCSCVHPDD RARVRAGELR
CLETGENHDE EYRVVWPDGT IRWLRETGNV VRNDHDAVIK MMGVVRDITE EKASASYLQH
LAHFDPLTGL PNRLVLEERL SEALEHARMT ETRVALVFID LNGFKAINDR YGHAAGDRVL
ITTATRLKRI LRVSDTVARI GGDEFVVILQ GLAPGLNLQD EARSICQKIF IELSPPIPIG
NEQRHIGTSL GVAVFPDHAP TMDRLLHIAD LAMYEAKRSG NNQYRLGGGQ TLSHGRAD
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