Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3481 |
Symbol | |
ID | 3713664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3964508 |
End bp | 3965452 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_349210 |
Protein GI | 255961272 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000172273 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0268237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTAC AGGTTACGAC AGTTAACGAG TACACGAAGT ACGACAGACA ATACAAGATT ACGATTGGTG ATTACGTCAA CGGTGACGGG ATTGAACTCA TCAGCACAGA AGTTGACGCC CCCCTTCAGA TTACCTTCAA TATTGAGAAG TCGGCAGACA CCAAGCACAA GAATGGTAAC TCCGGCTCTA TCGAAATCTA CAACCTGAAC CCTGAACAAG CATTGTTGAT GGACAGGAAA GACATCGAAG TTGCTTTGTA CGTTGGGTAC AACAACAGAG ATGGAATGAA GCTCCTAGCC TCTGGAAACA TGACCAAAGG CAAGACAGTT AAGCATGGAA CAGACACCAT TTCTGTTATT GAACTTGGTG AAGGTTATGT AGAGCTGACC CAAGCCCGCC TTAGTCGCAT CCTATCTCCC GGTCAAACTG TGGGGGATGT CATTGAAACC ATCAGAGAGT CTATGCCGGG TGTAGCCCGT GGTTCTATTG TCGGGACTAA CCTGAACAGT CCGATCATTG GCAGCTACCG CTTGAGTGCT ACAGCCAAAG AAGAGCTAGA CAAAATCACC AAAGCTTACG GGTTTCAATA CCATGTCACT AACGGCATTT TGAACGTTAC TGATGTTAAT GGCCCGAACT CCAGAAGCGT AGTTGATGTT CCTATCATCA GTGTCGATAC AGGCATGATT GATGAACCAT TTCAAACCAC GGAATACCTG AAGCTTCCTA AAGGCGATAA GCGTGCACGC TATGGCGTTC AAGTTGTAAC AGCCCTAGAC GCAACCATTG TGCCTAGTTC TGTAGTCAAG ATTGAATCTG AAAAAGTTAC AGGCTACTAC CGCGTGAATA CTGCTCGTTA TACAGGTGAC TTCCGTGGTA ATGACTGGCA GGTTGAGATT CAGTGCTCTG AAATGACACC TGATGACATT GACGTCCTAC AGTAA
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Protein sequence | MALQVTTVNE YTKYDRQYKI TIGDYVNGDG IELISTEVDA PLQITFNIEK SADTKHKNGN SGSIEIYNLN PEQALLMDRK DIEVALYVGY NNRDGMKLLA SGNMTKGKTV KHGTDTISVI ELGEGYVELT QARLSRILSP GQTVGDVIET IRESMPGVAR GSIVGTNLNS PIIGSYRLSA TAKEELDKIT KAYGFQYHVT NGILNVTDVN GPNSRSVVDV PIISVDTGMI DEPFQTTEYL KLPKGDKRAR YGVQVVTALD ATIVPSSVVK IESEKVTGYY RVNTARYTGD FRGNDWQVEI QCSEMTPDDI DVLQ
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