Gene Pfl01_3481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3481 
Symbol 
ID3713664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3964508 
End bp3965452 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content46% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349210 
Protein GI255961272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000172273 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0268237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTAC AGGTTACGAC AGTTAACGAG TACACGAAGT ACGACAGACA ATACAAGATT 
ACGATTGGTG ATTACGTCAA CGGTGACGGG ATTGAACTCA TCAGCACAGA AGTTGACGCC
CCCCTTCAGA TTACCTTCAA TATTGAGAAG TCGGCAGACA CCAAGCACAA GAATGGTAAC
TCCGGCTCTA TCGAAATCTA CAACCTGAAC CCTGAACAAG CATTGTTGAT GGACAGGAAA
GACATCGAAG TTGCTTTGTA CGTTGGGTAC AACAACAGAG ATGGAATGAA GCTCCTAGCC
TCTGGAAACA TGACCAAAGG CAAGACAGTT AAGCATGGAA CAGACACCAT TTCTGTTATT
GAACTTGGTG AAGGTTATGT AGAGCTGACC CAAGCCCGCC TTAGTCGCAT CCTATCTCCC
GGTCAAACTG TGGGGGATGT CATTGAAACC ATCAGAGAGT CTATGCCGGG TGTAGCCCGT
GGTTCTATTG TCGGGACTAA CCTGAACAGT CCGATCATTG GCAGCTACCG CTTGAGTGCT
ACAGCCAAAG AAGAGCTAGA CAAAATCACC AAAGCTTACG GGTTTCAATA CCATGTCACT
AACGGCATTT TGAACGTTAC TGATGTTAAT GGCCCGAACT CCAGAAGCGT AGTTGATGTT
CCTATCATCA GTGTCGATAC AGGCATGATT GATGAACCAT TTCAAACCAC GGAATACCTG
AAGCTTCCTA AAGGCGATAA GCGTGCACGC TATGGCGTTC AAGTTGTAAC AGCCCTAGAC
GCAACCATTG TGCCTAGTTC TGTAGTCAAG ATTGAATCTG AAAAAGTTAC AGGCTACTAC
CGCGTGAATA CTGCTCGTTA TACAGGTGAC TTCCGTGGTA ATGACTGGCA GGTTGAGATT
CAGTGCTCTG AAATGACACC TGATGACATT GACGTCCTAC AGTAA
 
Protein sequence
MALQVTTVNE YTKYDRQYKI TIGDYVNGDG IELISTEVDA PLQITFNIEK SADTKHKNGN 
SGSIEIYNLN PEQALLMDRK DIEVALYVGY NNRDGMKLLA SGNMTKGKTV KHGTDTISVI
ELGEGYVELT QARLSRILSP GQTVGDVIET IRESMPGVAR GSIVGTNLNS PIIGSYRLSA
TAKEELDKIT KAYGFQYHVT NGILNVTDVN GPNSRSVVDV PIISVDTGMI DEPFQTTEYL
KLPKGDKRAR YGVQVVTALD ATIVPSSVVK IESEKVTGYY RVNTARYTGD FRGNDWQVEI
QCSEMTPDDI DVLQ