Gene Pfl01_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3458 
Symbol 
ID3713583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3943084 
End bp3944328 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349187 
Protein GI77459680 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.243467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATC AACACTGGGG CCCATCCATC AGTGCGGACA TCGTGGTCAT CGGCGGCGGC 
ACTGCCGGCA TCGGTTTTGT CGCGAGCCTG CTCAAGCGCG ATCCCGGCCT GAAAATCACG
GTGATCGAGC CGAGCACCCT GCATTACTAC CAACCGGCGT GGACGCTGGT CGGCGGTGGC
GCCTATGACG CCAAAGACAC CGCCCGACCG ATGAACAAGG TGATGCCGCG CCAGGCCACC
TGGATTCAGG CCGCCGTGAC CGGCATCGAC CCCGACCAGC GCCGTCTCAC CCTCAACGAT
CAACGCACCA TCACCTATCA GAACCTGATC GTCTGCCCCG GCCTGCGCCT GGCGTGGGAG
AAGATCGAAG GCCTGCAGGA CAGTCTCGGC CAGCACGGCG TCACCTCCAA CTACAGCTAT
CAGCACGCGC AATACACCTG GGATCAGGTG CAGAAACTGG GCGGCGGCAA AGCGCTGTTC
ACCCAGCCGC CGATCCCGAT CAAGTGTGCC GGCGCGCCGC AAAAGGCGCT GTACTTGTCC
TGCGATCACT GGCTCAAGCG CAACGTGCTG AGTAAGGTCG ATGTCGAGTT CAATCTGGCC
GGTGCCGCGC TGTTCGGCGT GCCGACCTTC GTACCGCCGC TGATGAAGTA CATCGAGAAA
TACAACGCGC GGCTGGCATT CAATTCCAAT CTGGTGAAGG TCGACGGCCC GGCGAAAACT
GCCTGGTTCG ACGTCAAGGA TGCGGACGGC AACGTTACCC GTCAGGCCAA GACTTTCGAT
TTGTTGCACG TCGTCCCGCC GCAGGTTTCA CCGGATTTCA TCGCACAAAG TCCGCTGGCC
GACGCCGCCG GCTGGTGCGA GGTCAACCCG CATACGCTGC AACACCCGCG CTATCCGGAA
GTGTTTGCCT TGGGCGATAT CTGCGGCACC ACCCATGCGA AAACCGCCGC GGCAGTGCGC
AAGCAGGTCG TGGTGGTGGC GGAAAACCTG CTGGCGGTGC GCAAGGAACT GGCGCTGCCG
TTGAAGTACG ACGGCTACGG TTCCTGCCCG CTGACGGTGG AGAAGGGCAA GGTGATCCTC
GCCGAGTTCG GCTATGGCGG AAAACTGCTG CCAACCTTTC CCCTCGACCC GACCGTGCCG
CGCCGCTCCG CGTGGTGGCT GAAGGCGACG TTGCTGCCGT GGTTCTACTG GAACGGCATG
CTCAAGGGCC GCGAATGGCT GACAAGTCTG TCCAGGGTCG ACTGA
 
Protein sequence
MNDQHWGPSI SADIVVIGGG TAGIGFVASL LKRDPGLKIT VIEPSTLHYY QPAWTLVGGG 
AYDAKDTARP MNKVMPRQAT WIQAAVTGID PDQRRLTLND QRTITYQNLI VCPGLRLAWE
KIEGLQDSLG QHGVTSNYSY QHAQYTWDQV QKLGGGKALF TQPPIPIKCA GAPQKALYLS
CDHWLKRNVL SKVDVEFNLA GAALFGVPTF VPPLMKYIEK YNARLAFNSN LVKVDGPAKT
AWFDVKDADG NVTRQAKTFD LLHVVPPQVS PDFIAQSPLA DAAGWCEVNP HTLQHPRYPE
VFALGDICGT THAKTAAAVR KQVVVVAENL LAVRKELALP LKYDGYGSCP LTVEKGKVIL
AEFGYGGKLL PTFPLDPTVP RRSAWWLKAT LLPWFYWNGM LKGREWLTSL SRVD