Gene Pfl01_3406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3406 
Symbol 
ID3713394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3885692 
End bp3886234 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content62% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349135 
Protein GI77459628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA GTACCCAGCA CAAGCTCGAC CGGGTTCGCC CGCCCCGCGT GCAAATCACC 
TATGACGTCG AAATCGGCAA CGCCATCGAG AAAAAGGAAT TGCCGCTGGT GGTCGGCATC
CTCGCCGACC TCTCGGGCAA GCCGCTCGAA CCATTGGCAA AACTGACCGA ACGCCGTTTC
ACCGAAATCG ACCGCGACAA CTTCAACGAC GTCCTCGCCT CCATCGCGCC CCGCGCCACG
CTGCAAGTCA ACAACACCCT CAGCGGCGAC GACAGCAAGC TCAACATCGA ACTCAACTTC
AAGCACATCG ACGACTTCGA CCCGGTCAAG GTGGTGGAGC AAGTCACGCC GCTGCGGCGT
CTGTTCGAAG CCCGCCAGCG CCTGCGCGAC CTGCTGACCA AACTCGACGG CAATGACGAT
CTGGACAAGC TGCTGCGCGA CGTCATCGCC AACACCGAAG GCTTGCAAGA GATCAAGTCG
GCCCGCCCGG ACACCGCTGT CCCGGCCGCT GATACCGAAG CTCCGGCCGA ACCGCAAGCC
TGA
 
Protein sequence
MAESTQHKLD RVRPPRVQIT YDVEIGNAIE KKELPLVVGI LADLSGKPLE PLAKLTERRF 
TEIDRDNFND VLASIAPRAT LQVNNTLSGD DSKLNIELNF KHIDDFDPVK VVEQVTPLRR
LFEARQRLRD LLTKLDGNDD LDKLLRDVIA NTEGLQEIKS ARPDTAVPAA DTEAPAEPQA