Gene Pfl01_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3401 
Symbol 
ID3713389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3877953 
End bp3879041 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content64% 
IMG OID 
ProductImpA-like 
Protein accessionYP_349130 
Protein GI77459623 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.840642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGC CCTCGACCCC GTTGCCGGAC CTGATCGATC AGTTGCTTGC GCCCATCAGC 
GACGATGCGC CCTGTGGTGC GGATCTGCGT TATGAGCGCG AGTACGACCA GTTGCGCGAT
CTGCGCCGCG AGGACGACGC GAGTCTGCCC ACGGGTGTCT GGCAGTCGAC CCTGAAACGG
GCCAACTGGC CGGAAGTCGA GCGGTTGACC ACCACGCTAT TGCTCGAGCG CAGCAAGGAC
CTGATGCTCA GTGCCTGGCT GGGCGAGGCC TGGCTGCATT TGCAGGCACT CGATGGACTG
CCGGGCAGTC TGGCGCTGAT CACCGGTCTG TGTGAGCGCT ATCCCGAACA TTTGCACCCG
CAGGCCGGCG ACGGTGACCA GTCGTGGCGG GCGATTCCGC TGGAATGGCT GGTGCGTCGC
TACAGTGAAG TACTGCTGAC CCGGGTGCCT TTATTTGGCG CCAACAACAG CGATTTTGAG
AGTTATACCC TCGAAACCTG GCGGCGGATT CAGGTGCAGC AGGTGCAGGC CAACGACTCC
AAAGGCGCCA AGGCGTCGGC CGAAACTGCG CGCAGCGAAC ACAAGAAGCT CATCGAGCAG
GTGCGGGCCA CGCCCATGGC GTTCTGGCTG CGCCATCAAG GCAATCTGCT GCTGAGCCTG
CAACACCTGC AGCGTCTGGA TGCCTGGTGC GATGCGTATC TGGGAGATCA GGGGCCGGGG
CTCGGTCCGT TGCAGGACAC CCTTCAAGCG TTGTTGACAC TGGTTCAGGA GTTCATCGCC
ATGCACCCAC AACAACCACT GTCGGCACCG CCGCCTGCGC CGGTCGCAGT CTCACCGGTT
GAAGCGTCTG TCGCGGCCAC GCCCGAAGCC GCGCCAGTGC CGCGCGAACC GGCCAGTCGA
GAAGAGGCTT ATCGGCAATT GCTGCTGATC GCCGAGTACC TGGCCCGCAC CGAACCCCAC
AGCCCGGTGC CGTATCTGAT CCGGCGCGGG GTGGAATGGG GCAACAAGCC GTTAAGCGAG
CTGCTCGGCG AGCTGATTTC GGCAGACGCC GAATCCCGGC GTCTGTGGAC TTTGCTCGGC
GTGCTTTAG
 
Protein sequence
MSLPSTPLPD LIDQLLAPIS DDAPCGADLR YEREYDQLRD LRREDDASLP TGVWQSTLKR 
ANWPEVERLT TTLLLERSKD LMLSAWLGEA WLHLQALDGL PGSLALITGL CERYPEHLHP
QAGDGDQSWR AIPLEWLVRR YSEVLLTRVP LFGANNSDFE SYTLETWRRI QVQQVQANDS
KGAKASAETA RSEHKKLIEQ VRATPMAFWL RHQGNLLLSL QHLQRLDAWC DAYLGDQGPG
LGPLQDTLQA LLTLVQEFIA MHPQQPLSAP PPAPVAVSPV EASVAATPEA APVPREPASR
EEAYRQLLLI AEYLARTEPH SPVPYLIRRG VEWGNKPLSE LLGELISADA ESRRLWTLLG
VL