Gene Pfl01_3393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3393 
Symbol 
ID3713381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3869601 
End bp3870464 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349122 
Protein GI77459615 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCA TTCGCAGCAT TCTGGTGGTC ATCGAACCCG AACACGCGGA AAGCCTGGCG 
CTCAAGCGCG CCAAACTGAT CGCCGGGGTG ACCCAGGCCC ATCTGCACCT GCTGGTCTGC
GACAAGAAGC ACGATCACGC CGGCATGCTC AGCGTGCTCA AGGCCGCGCT TTTGGCGGAC
GGCTACAGCG TCACCACCGA ACAGGCGTGG AACGAGAGCC TGCACGAAAC CATCATCGAT
GTGCAGCAGG CTGAAGGCTG CGGGCTGGTG ATCAAGCAGC ACTTCCCCGA CAGCCCGTTG
AAAAAGGCCC TGCTGACCCC GGCGGACTGG AAACTGCTGC GCCACTGCCC TACTCCGGTG
CTGCTGGTGA AGACCGCCGG TTCGTGGAAG GACAAGGTGA TTCTGGCGGC CGTCGACGTG
GGCAATGCCG ATGGCGAACA TCGTCATCTG CACACCACGA TCATCGACCA TGGATTCGAC
ATTGCCAGCC TGGCCAAAGG GCATCTTCAC GTGATTACCG CTCATCCGTC GCCGATGCTG
TCGGCGGCCG ACCCGACGTT CCAGCTCAAG GAAACCATCG AGGCACGCTA TCGCGAGCAA
TGCCGGGCGT TTCAGGCTGA GTTCGACATC GATGACGAGC ATTTGCATGT CGAGGAAGGT
CCGGCGGACG TGTTGATTCC GTTCATGGCG CACAAGCTGC AGGCGGCGGT GACCGTGATT
GGCACCGTGG CGCGCAGTGG CGTATCCGGT GCCTTGATCG GCAACACGGC CGAACAGGTG
CTGGATCAGC TGGAGAGTGA TGTGCTGGTG CTCAAACCCC AGGAGGTTGA AGACCATTTG
GTGGAGTTGG CGGTGAAACA TTAA
 
Protein sequence
MQAIRSILVV IEPEHAESLA LKRAKLIAGV TQAHLHLLVC DKKHDHAGML SVLKAALLAD 
GYSVTTEQAW NESLHETIID VQQAEGCGLV IKQHFPDSPL KKALLTPADW KLLRHCPTPV
LLVKTAGSWK DKVILAAVDV GNADGEHRHL HTTIIDHGFD IASLAKGHLH VITAHPSPML
SAADPTFQLK ETIEARYREQ CRAFQAEFDI DDEHLHVEEG PADVLIPFMA HKLQAAVTVI
GTVARSGVSG ALIGNTAEQV LDQLESDVLV LKPQEVEDHL VELAVKH