Gene Pfl01_3389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3389 
Symbol 
ID3713339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3865765 
End bp3866664 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content61% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349118 
Protein GI77459611 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCC GACCCAAGGT CAATCAATTC GCCATTCTCT TCACCCTCAA GGGCTCGATT 
GCCAAGCGCA TCGCCCTGCG CACCCTGATG GTCACACTGC TGGCGTCGGC CATCGTGCTG
GTGGAAATGC TCCACCCGAG CAACTTCACC AAGGTCAACG CCACGCCGTT CACGCTGCTC
GGCCTGTCGC TGTCGATCTT CATGAATTTT CGCAACAACG CCTGCTACGA CCGCTGGTAC
GAAGCGCGCA AGGCTTGGGG CGATGTGATC GTGCATGTGC GCTCGGTGAT TCGCGAGACC
CATGTGATCC GCGAATCGGC CCAGCGTCGG TTATTGCTGC TTAACCTTTG TGGTTTCGCC
CACGCGCTGA ATGCGCGACT GCGCCGGGAA GACGAAGCCG CCGCCAGCGC TCAATGGATC
ACCCCGCAAC ACGATGCGCA GGTGCCGGAT TACAGCGGGC GAATCCTGCA GACGGTGGGT
CAGCAATGCT CCGATCTGCA TGAGGCGGGC GATCTCAGTG AATGGCGCTA CATGCTGCTG
GCCAATCACC TGACCAGCCT GACCCAGGCG CAGGCGGTGT GCGAGCGGAT CAAGAACACG
CCGCTGCCCT TCCCCTATAC CTTGCTGCTG CATCGCACGA TTTACCTGTT CTGCATCCTG
CTGCCGTTCG CCATGGCCGA ACCGCTGGGG TGGCTGACGC CGCTGTTCAC GGCGATTGTC
AGCTACACCT TCTTCGGCCT GGATGCGATT GCCGATGAAC TGGAAGACCC GTTCGGCCGG
GATGAAAACG ATTTGCCGAC CGATGCGCTG GTGCGGGGTA TCGAGCGGGA TATTCTCTCG
GAGCTGGGGA CTGAACCGTT GCCGCCAGCG CTGAAACCGG TGGACTACGT CCTCAGTTAA
 
Protein sequence
MIIRPKVNQF AILFTLKGSI AKRIALRTLM VTLLASAIVL VEMLHPSNFT KVNATPFTLL 
GLSLSIFMNF RNNACYDRWY EARKAWGDVI VHVRSVIRET HVIRESAQRR LLLLNLCGFA
HALNARLRRE DEAAASAQWI TPQHDAQVPD YSGRILQTVG QQCSDLHEAG DLSEWRYMLL
ANHLTSLTQA QAVCERIKNT PLPFPYTLLL HRTIYLFCIL LPFAMAEPLG WLTPLFTAIV
SYTFFGLDAI ADELEDPFGR DENDLPTDAL VRGIERDILS ELGTEPLPPA LKPVDYVLS