Gene Pfl01_3355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3355 
Symbol 
ID3713286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3828793 
End bp3830160 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content63% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_349084 
Protein GI77459577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.326313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCGA TCCGGCGCCG CACCCTGACC CTGATCATCG GCCTGATGCT CGCCGGTCTG 
ACCGTGCTCA GCCTGTTCAA TCTGCACGAC AGCAACCACG AAATCGCCGA AGTCTACGAC
GCGCAACTGG CGCAGAACGC ACGGTTGCTG CAAGGTGTGA TGCGCATGCC GTTGCAGGGG
CAGGAGCACG CGGATCTTTA TCGGGCGTTC AACTCGGCCC TGGCTGAAGC CGTGCCCAAG
GGTGACGGCC ATCCCTACGA GAGAAAGCTC GCCTTTCAGG TCTGGAATGC CAAGGGCGAG
GTTCTGGTGC ATACCGCCAG CGCGCCCTCC TTCAGCACGC CGCCGATCCA GCCAGGCTTC
AGTGATGTGG TGGATTTGAA CAAGCGCCAC TGGCGGGCGT TTGTCCTGGA AGACCGACAG
AACGGTTTGC GCATCTGGGT GGGTGAACGC GGTGACGTGC GAGCGGATCT GGTTGACCGG
ATCGTCCGCC ATACCCTGTG GCCGAACGTG ATCGGCAGCC TGATTCTTGC GGCGATGATC
TGGCTGGCCA TCGGCTGGGG GCTCAAGCCC CTGGCCAACA TGGCGGCGAC CCTGCGCGCC
CGTCACAGCG GCTCCCTCGA ACCGCTGCAA TTGACACCGC TGCCCAGCGA ACTGGAACCG
ATGCAGGCCG CGCTCAACCG CATGCTTGCG CAAATCCAGG AAGTGCTCGG TCGCGAGCGC
CGGTTCATCG CCGACGCCGC CCACGAAATG CGCACGCCAC TGGCGGTACT GCGGGTGCAT
GCGCAAAACC TGCTGGAGGC CGGCACCGAA CAGGAGCGTC GCGAGTCACT CGAATTTCTG
ATCGCCGGGG TGGATCGCAC CAGCCGACTG GTCAATCAGC TACTGACCAT GGCCCGCCTC
GAACCCAAGG CCAGCGCGCC TGCCAAACAA CGCATCGACC TTGGCGACAC CGTGCGCAAC
AGTCTGGTGC AACTCACGCC ATGGCTGCTG AGCAAGCATC TGGAATTGGC CTTCGACGTC
AACGACCAAC CTTTCCCTGT GCTCGCCGAT GCCGCCACCA TCGACATTGC CCTGAACAAC
CTCATCACCA ATGCCGCCAA CTTCTCCCCG GAGCAAGGCG TGATCAGCGT GCAATTGACC
AGGGCCGACG GGCTTTACCA TTTGAGCGTT GAAGATCAGG GGCCGGGTAT CGATGAAGCG
GATCGGGCTC GATTGTTCGA GCGGTTCTAC AGCCGGGGCA ATCCCCAGGG TGCCGGGCTG
GGACTGACCA TCGTCAATAC CATCGCAACC CGTCTGGGTG GGCGGATCAC ACTGGAAAAC
CGGGTCGAGG GCGGCCTGCG GGCGACGTTG TCGATTCCCG CCGGTTGA
 
Protein sequence
MTSIRRRTLT LIIGLMLAGL TVLSLFNLHD SNHEIAEVYD AQLAQNARLL QGVMRMPLQG 
QEHADLYRAF NSALAEAVPK GDGHPYERKL AFQVWNAKGE VLVHTASAPS FSTPPIQPGF
SDVVDLNKRH WRAFVLEDRQ NGLRIWVGER GDVRADLVDR IVRHTLWPNV IGSLILAAMI
WLAIGWGLKP LANMAATLRA RHSGSLEPLQ LTPLPSELEP MQAALNRMLA QIQEVLGRER
RFIADAAHEM RTPLAVLRVH AQNLLEAGTE QERRESLEFL IAGVDRTSRL VNQLLTMARL
EPKASAPAKQ RIDLGDTVRN SLVQLTPWLL SKHLELAFDV NDQPFPVLAD AATIDIALNN
LITNAANFSP EQGVISVQLT RADGLYHLSV EDQGPGIDEA DRARLFERFY SRGNPQGAGL
GLTIVNTIAT RLGGRITLEN RVEGGLRATL SIPAG