Gene Pfl01_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3343 
Symbol 
ID3713274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3817423 
End bp3818673 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content65% 
IMG OID 
Producttransmembrane protein 
Protein accessionYP_349072 
Protein GI77459565 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGACG CACTGGGTCT GGCGGGGGCC GCCGCGGCGT TGGGCATCGG CATGCTGGTC 
GGTCTGGAGC GCGAGCGGCA CAAAGGGCGC GGCGACAGCC GTGCCTGTGC CGGGTTGCGC
ACGTTCGCGA TCACGGCGCT GCTGGGTTAC GTCGCGATGC AAGTGGGCGG CGCACTGCTG
TTGGGCATTG TGGGCGGCTG TCTGGCGGTG CTGATCGGCG TGGCTTATTG GCGCAGCCTG
AGCACTGATC CGGGGCTGAC CAGCGAAGTG GCCTTGCTCA CGGTGCTGGT ACTGGGTGCG
CTATGCGGCA CAGCGCCGGA ACTGGCAATC GCCATTGGCG TGGTCATGGC GGGGCTGCTG
GCTTACCGGC AGAAACTCCA TCACTTCGCC CGCAGCCAGT TGAGCGAAGC GGAGATGCGC
GATGGGTTGG TGCTGCTGAT CGCAGCATTG GTGGTGTTGC CGCTGACGCC TGACCGGTTC
ATCGGTCCCT ACTCGGCACT CAACCTGCGC ACCCTTTGTA CATTGACCGT GTTGCTGATG
GCCGTCGGCG CCATCGGGCA TATCGCCGTG CGCACGCTGG GTGTGCGCTA CGGCTACGCG
GTCAGCGCCA TCGCGTCCGG TTTCGCCTCC AGCACCATGA CGATTGCGGC GATGGGGCAT
ATCGCCCGCA AAGACCCGGA GCACCTCAAG GTATTGAGTG CGGCGGCCCT GCTGTCGAAC
CTGGCCACGG CGGCGCAGGT CGCGCTGATC CTCGGCACGG TCGACACCGC GCTGTTGCCG
CACCTGTGGG GGCCGTTGCT GGCCGGGTTT GGCGTAACGC TGCTGTTCAG CCTGGGCCTG
CTGTTCCCCA GGCCTGCGGT CGCTGCGAAC CAACCGATCA AGGTCGGCGG GGCGTTCAAT
CTCAAGCTCG CGCTGGCGGT CACGTTGACC ATGGCCGGCG TGACGTTTTT GTCTTCGCTG
ATGCTCGATC ACTTTGGCGA GGCGGGCGTG ATGCTGACTG CCGTACTCAG CGGATTCGCC
GATGCTCATT CTTCCACGGC GTCGATTGCC ACCCTCGCCA AGGGTGGACT GTTGGATTAC
GCCGCCATTG CGCCGCCCGT GCTGCTGGCG GTCAGCAGTA ACGCATTGAG CAAATGCCTG
GTGGCCTGGA TCAGTGGCGG ACGCCGTTTC GCCGCGTATG TCATACCCGG TCAGATTCTG
TTGACCGCTG CCATGTGGGC CGGTCTGCTG GTGGATCGAG CGACGATTTG A
 
Protein sequence
MSDALGLAGA AAALGIGMLV GLERERHKGR GDSRACAGLR TFAITALLGY VAMQVGGALL 
LGIVGGCLAV LIGVAYWRSL STDPGLTSEV ALLTVLVLGA LCGTAPELAI AIGVVMAGLL
AYRQKLHHFA RSQLSEAEMR DGLVLLIAAL VVLPLTPDRF IGPYSALNLR TLCTLTVLLM
AVGAIGHIAV RTLGVRYGYA VSAIASGFAS STMTIAAMGH IARKDPEHLK VLSAAALLSN
LATAAQVALI LGTVDTALLP HLWGPLLAGF GVTLLFSLGL LFPRPAVAAN QPIKVGGAFN
LKLALAVTLT MAGVTFLSSL MLDHFGEAGV MLTAVLSGFA DAHSSTASIA TLAKGGLLDY
AAIAPPVLLA VSSNALSKCL VAWISGGRRF AAYVIPGQIL LTAAMWAGLL VDRATI