Gene Pfl01_3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3342 
Symbol 
ID3713273 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3816417 
End bp3817334 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349071 
Protein GI77459564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.662627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGG AACCCCGCCT GCTGCTGATC GCTCCGCCCT CCATGCACCA CACGCCGGCA 
TTCGATCGTG CCTTGGCATT GGCGCAGGCG CTGCAAAGAC CGCTGCATAT CGTGGCATTC
GATTATTTAC AGGCGCTGGC CGTGGTCGGG CTGTTTGCCC CCGAACAGGT GGCCGTGGCC
CGTGACGCCT ACCTGGAGAA GCATCGCCAC TGGCTTGAAG AACAGGCAAC ACGGATGCGT
GGACACGGGA TCGTTGTCAC GAGCGAAGTG GTCTGGGTTC AGGACCCTTA CGCGGAGATT
CTGCAGTTCA TCAATGAAAT GCCGCTGGTG ATGATCATCA GGGATGCCCA CGAAGAGTCG
GTCCTGAAAC GAGTGTTTTT TACCCCGCTG GACTGGCAAC TGCTGCGCGA TTGCCCGATC
CCGGTACACC TCGTGACCAA CGCCTTGAAC CCACGCCCCC GTCATGTTCT GGCGATCATC
GACGTGCTTC GCAGCGAAGA TCAGGATCTG GTGTTCAACG ACCAGATTAT CGATGCCGCA
TCGAAGCTGG CCGAGGTGTG CAATGCCCGG CTGCAGTTGT TGCACGTCTA CGATTGGACC
GCCGCCTATG CGCAGGACTT CGGGTTTGGT GCGTTGCCGC TGGCCACCGG TATCTACGAG
GCGCTGGGCA CAGCACAGCA TGAGGCGTTT GCCGCGATGG CCGAGCGTCA TGGCGTGTCG
AATGAGTGTC GTCATTTCAT CGAAGGTGTG CCGGTGCCGG CCATTTGCCG ATTTGTCGAA
GAGCAAAACG TCGACGTGAT CGTGGCGGGG ACGGTGCAGA ACAAAGGGAT GAACAAACTC
TTGGGCACCA CGGCCGAACA GCTCTTGCAC CGGGCACCGT GCAGTGTGTT GGCGATCAAG
CCGGGCAGGG GGCTCTAG
 
Protein sequence
MSQEPRLLLI APPSMHHTPA FDRALALAQA LQRPLHIVAF DYLQALAVVG LFAPEQVAVA 
RDAYLEKHRH WLEEQATRMR GHGIVVTSEV VWVQDPYAEI LQFINEMPLV MIIRDAHEES
VLKRVFFTPL DWQLLRDCPI PVHLVTNALN PRPRHVLAII DVLRSEDQDL VFNDQIIDAA
SKLAEVCNAR LQLLHVYDWT AAYAQDFGFG ALPLATGIYE ALGTAQHEAF AAMAERHGVS
NECRHFIEGV PVPAICRFVE EQNVDVIVAG TVQNKGMNKL LGTTAEQLLH RAPCSVLAIK
PGRGL