Gene Pfl01_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3243 
Symbol 
ID3713078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3723993 
End bp3724802 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content63% 
IMG OID 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_348972 
Protein GI77459465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.796458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTGA CGCCCAATGC CATGAGTCGC CGGATGCGCT TCGGCCTGTA TTTCACCACC 
GGGTTGATCG GCCTGTTCCT GCTGTTGCCG ATCGTGTTCA TCGTCCTGCT GTCGTTCGGT
TCGTCCCAGT GGCTGGTGTT CCCGCCACCG GGCTGGACGC TGAAATGGTA CGTGCAGTTT
TTCTCCAATG CCGACTGGAT GAGCGCAGCG CTGGCCAGCC TCAAGGTCGC GGTGCTGACC
ACGATCTGCG CCGTCGCCCT CGGTTTGCCG ACGGCCTTTG CGCTGGTGCG CGGACGCTTC
CCCGGCCGGG AAATGCTCTA CGGCCTGTTC ACCCTGCCGA TGATCGTGCC GCTGGTGATC
ATCGCCGTGG CGGTGTACGC GCTGTTCCTC AAGCTCGGCT ACACCGGCAC GATGTTCGCC
TTCGTCGTCA GCCACGTGAT CGTCGCGCTG CCGTTCACCA TCATCTCGAT CATCAATTCG
CTGAAGCTGT TCGATCAGTC GATTGAAGAC GCGGCGGTGA TCTGCGGTGC GTCACGCCTG
CAAGCGGTGT TCAAGGTGAC CTTCCCGGCG ATCCGTCCGG GGATGGTGGC CGGCGCCCTC
TTCGCCTTCC TGGTTTCGTG GGACGAAGTG GTGCTCAGCG TGATGATGGC CAGCCCGACC
CTGCAAACCC TTCCCGTGAA AATGTGGACC ACCCTGCGCC AAGACCTGAC GCCCGTGATC
GCCGTCGCCT CGACGCTGCT GATCGGCCTG TCGGTATTGG TCATGGTGAT CGCCGCCGCC
CTGCGCCGGC GCAACGAAAT CAGCGCCTGA
 
Protein sequence
MLLTPNAMSR RMRFGLYFTT GLIGLFLLLP IVFIVLLSFG SSQWLVFPPP GWTLKWYVQF 
FSNADWMSAA LASLKVAVLT TICAVALGLP TAFALVRGRF PGREMLYGLF TLPMIVPLVI
IAVAVYALFL KLGYTGTMFA FVVSHVIVAL PFTIISIINS LKLFDQSIED AAVICGASRL
QAVFKVTFPA IRPGMVAGAL FAFLVSWDEV VLSVMMASPT LQTLPVKMWT TLRQDLTPVI
AVASTLLIGL SVLVMVIAAA LRRRNEISA