Gene Pfl01_3235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3235 
Symbol 
ID3713070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3717940 
End bp3718329 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content61% 
IMG OID 
Product4-carboxymuconolactone decarboxylase 
Protein accessionYP_348964 
Protein GI77459457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.621974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG AAAAGTACGA GCAAGGCCTG AAGATCCGCA CCCAGGTGCT GGGCGAAGCC 
TATGTGCAGC GCTCGATCGA GAACGCCGAC GACTTCACCC GCCCGCTGCA GGAAATGGTC
ACTGAATACT GCTGGGGCCA CGTCTGGGGA CGCGAGGGCC TGTCGCTCAA GGAGCGCAGC
ATGATCAACC TGGCGATGAT CTCGGCGCTC AACCGCCCGC ACGAACTGAA ACTGCATGTG
CGCGGCGCCT TGCGTAACGG CCTGAGTCGT GAGCAAATAC GCGAAATTCT GCTTCAGGTC
GGTATTTATT GCGGCGTCCC GGCAGCCGTG GACAGTTTCC GGCTTGCCCG TGAAGCCTTC
GCCGAAGCCG ACGCCGAGGC CTCCAGTTAA
 
Protein sequence
MSNEKYEQGL KIRTQVLGEA YVQRSIENAD DFTRPLQEMV TEYCWGHVWG REGLSLKERS 
MINLAMISAL NRPHELKLHV RGALRNGLSR EQIREILLQV GIYCGVPAAV DSFRLAREAF
AEADAEASS