| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3201 |
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| Symbol | |
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| ID | 3713017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 3676891 |
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| End bp | 3677331 |
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| Gene Length | 441 bp |
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| Protein Length | 146 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | alkylhydroperoxidase AhpD core |
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| Protein accession | YP_348930 |
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| Protein GI | 77459423 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.601606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00337027 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCACCGC GTCTGGATTA CTACAGCGCA TCACCCAAAG CCATGAAAGC GATGATTGGC
CTGGAAGCGC TGACCAGCAA CCTGAGCATC GAACCGCCGC TGCTGCACCT GATCAAGATC
CGCGCCTCGC AGCTCAACGG CTGCGCGTTC TGCACCGACA TGCATTCGGT GGAAGCGCGA
CGGGCCGGGG AGACGGATCG GCGGCTGTAC GCCATCGCGG TCTGGCGCGA CAGCGGCTTC
TTCAACCTGC GCGAGCGGGC GGCGCTGGCC TGGACCGAGG CGGTGACGCT GCTGGCGGAC
AGCCGGGTGC CCGACGATGT TTACCAGCAG GCGCGGGAAC AGTTCAACGA GACGGAACTG
GTGGACCTGA CCATTGCCGT CAGCACCATC AACAGCTGGA ATAGGCTGGC GGTGAGCTTC
CGCCAGATTC CCAGCGATTG A
|
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| Protein sequence | MSPRLDYYSA SPKAMKAMIG LEALTSNLSI EPPLLHLIKI RASQLNGCAF CTDMHSVEAR
RAGETDRRLY AIAVWRDSGF FNLRERAALA WTEAVTLLAD SRVPDDVYQQ AREQFNETEL
VDLTIAVSTI NSWNRLAVSF RQIPSD
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