Gene Pfl01_3196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3196 
Symbol 
ID3713012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3673361 
End bp3673969 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_348925 
Protein GI77459418 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.114017 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00348326 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACAGAC AACAAGGTTT TACGCTGATC GAGGTGATGG TCGCGATTCT GTTGATGGCG 
GTGGTCAGTC TGATTGCCTG GAAGGGGCTG GACAGTGTCA CGCGCGCCGA CAGCCATTTG
CAGGCCAGTG GTGAGCAGAG CGACAGCCTG TTGCGGGCGT TGAATCAGAT GCAGCGGGAT
GTGGAGATGC GCGCCGGGGT CGAGCTGACG GAGCCGAAGA AGGTCGGCAC CGAGGATGAA
CCGGCGACTG CTCCGCCTGC GCTTACCGTG CGCAGCAGTG ACAGCAAGGG GTTTCGGCTG
GACATCATTC GGAGCGCGGC GGATCAGCCG GGGGCGTTGC AGCGGGTGCG GTGGTGGCTC
AAGGGGGACA CGTTGTATCG CGCGGTGGCG CCGGCGCGGA GTCGGTATCC GTTGCCGGCG
CCTACGGCTG GGGTGGCGGT TTTGGGTGAG GTGAGTGATT TGCAGGTGCG GGTTTGGGAG
ATGGATAAGG GGTGGCGGCA GTTGAGCGGG AATCGGCGGG AGGATCCGTT GGGGTTGGAG
GTGAAGTTGA CCCGGCAGAC ACCGCAAGGG CCGGAGAAGT ACCGGCAAGT CATGGGACCG
TTGCAGTAA
 
Protein sequence
MNRQQGFTLI EVMVAILLMA VVSLIAWKGL DSVTRADSHL QASGEQSDSL LRALNQMQRD 
VEMRAGVELT EPKKVGTEDE PATAPPALTV RSSDSKGFRL DIIRSAADQP GALQRVRWWL
KGDTLYRAVA PARSRYPLPA PTAGVAVLGE VSDLQVRVWE MDKGWRQLSG NRREDPLGLE
VKLTRQTPQG PEKYRQVMGP LQ