Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3164 |
Symbol | |
ID | 3712924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3632821 |
End bp | 3633567 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | GntR family transcriptional regulator |
Protein accession | YP_348893 |
Protein GI | 77459386 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.61715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATA ACGTTCTCTC CCTGGGCAGC GTCCCGCTGC ACACCCAACT GCGCGACGTA CTGCGCGCCC GCATCCTCGA CGGCGAATAC CCGCAGGACA GCCAGATGCC GTCCGAAAGC GAGCTTGGAA CGCTGTTCAA GGTCAGCCGC ATCACCGTGC GCCAGGCCCT GGGCGATCTG CAGAAAGAAG GGCTGATCTT CAAGATCCAC GGCAAAGGCA CCTTCGTCGC CAAGCCCAAG ACCTTTCAAA ACGTCAGTAC CCTGCAAGGC CTCGCCGAGT CCATGACCGG CCGTGGCTAC GAGGTGATCA ACCGCCTGCG CAGCTTCAAA TTCATCGCCG CCGACAAACT GGTTGCCGAG CGTTTGCAGG TCGCCGAAGG CGAAATCGTC GCGCAGATAA AGCGTGTACG GCTGATCAAC CGCGAGCCGA TTTCGCTGGA AATCACCTAC CTGCCCAAAG CCGTCGGCGA ACGGCTGGAG AAGGCCGATC TGGTCACCCG CGACATTTTC CTGATCCTCG AGAACGACTG CGGCATAGCC CTCGGCCATG CCGATCTGGC CATCGACGCG GTGCTGGCCG ACAGCGACCT GACCCAGGCA CTGAACGTCG AGGCCGGCTC GCCGATCATG CGCATCGAGC GGCTGACCCA CGACGCTCAC GGCCAGCCGC TGGACTTCGA ACACCTTTAC TACCGTGGCG ATGCGTTCCA GTACCGCCTG CGGATCGACC GGCAAAAAGG GGCGTGA
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Protein sequence | MTDNVLSLGS VPLHTQLRDV LRARILDGEY PQDSQMPSES ELGTLFKVSR ITVRQALGDL QKEGLIFKIH GKGTFVAKPK TFQNVSTLQG LAESMTGRGY EVINRLRSFK FIAADKLVAE RLQVAEGEIV AQIKRVRLIN REPISLEITY LPKAVGERLE KADLVTRDIF LILENDCGIA LGHADLAIDA VLADSDLTQA LNVEAGSPIM RIERLTHDAH GQPLDFEHLY YRGDAFQYRL RIDRQKGA
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