Gene Pfl01_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3164 
Symbol 
ID3712924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3632821 
End bp3633567 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content62% 
IMG OID 
ProductGntR family transcriptional regulator 
Protein accessionYP_348893 
Protein GI77459386 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.61715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA ACGTTCTCTC CCTGGGCAGC GTCCCGCTGC ACACCCAACT GCGCGACGTA 
CTGCGCGCCC GCATCCTCGA CGGCGAATAC CCGCAGGACA GCCAGATGCC GTCCGAAAGC
GAGCTTGGAA CGCTGTTCAA GGTCAGCCGC ATCACCGTGC GCCAGGCCCT GGGCGATCTG
CAGAAAGAAG GGCTGATCTT CAAGATCCAC GGCAAAGGCA CCTTCGTCGC CAAGCCCAAG
ACCTTTCAAA ACGTCAGTAC CCTGCAAGGC CTCGCCGAGT CCATGACCGG CCGTGGCTAC
GAGGTGATCA ACCGCCTGCG CAGCTTCAAA TTCATCGCCG CCGACAAACT GGTTGCCGAG
CGTTTGCAGG TCGCCGAAGG CGAAATCGTC GCGCAGATAA AGCGTGTACG GCTGATCAAC
CGCGAGCCGA TTTCGCTGGA AATCACCTAC CTGCCCAAAG CCGTCGGCGA ACGGCTGGAG
AAGGCCGATC TGGTCACCCG CGACATTTTC CTGATCCTCG AGAACGACTG CGGCATAGCC
CTCGGCCATG CCGATCTGGC CATCGACGCG GTGCTGGCCG ACAGCGACCT GACCCAGGCA
CTGAACGTCG AGGCCGGCTC GCCGATCATG CGCATCGAGC GGCTGACCCA CGACGCTCAC
GGCCAGCCGC TGGACTTCGA ACACCTTTAC TACCGTGGCG ATGCGTTCCA GTACCGCCTG
CGGATCGACC GGCAAAAAGG GGCGTGA
 
Protein sequence
MTDNVLSLGS VPLHTQLRDV LRARILDGEY PQDSQMPSES ELGTLFKVSR ITVRQALGDL 
QKEGLIFKIH GKGTFVAKPK TFQNVSTLQG LAESMTGRGY EVINRLRSFK FIAADKLVAE
RLQVAEGEIV AQIKRVRLIN REPISLEITY LPKAVGERLE KADLVTRDIF LILENDCGIA
LGHADLAIDA VLADSDLTQA LNVEAGSPIM RIERLTHDAH GQPLDFEHLY YRGDAFQYRL
RIDRQKGA