Gene Pfl01_3154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3154 
Symbol 
ID3712879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3621772 
End bp3623529 
Gene Length1758 bp 
Protein Length585 aa 
Translation table11 
GC content63% 
IMG OID 
Productamidohydrolase-like 
Protein accessionYP_348883 
Protein GI77459376 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAT TCATCCCGCT TTTCACAAAA AATCTGCTGA TCGCCGCTAT GAGTTTTGCC 
TCGATGGAAG CCATGGCCGC CACCGATCTG GTGCTGTTCA ATGGCAAGAT TTTCACCGCC
GACCGCGCTC AACCGAAGGT TCAGGCGCTG GCCGTGGAGA ACGGCAAGGT GCTGAAAGTC
GGCAGCGATG CGCAGATCAA GGCCTTGATC GAACCCGGCA CCCAGGTCAT CGACCTGAAA
GGCCAGGCGC TGATGCCCGG CCTGATCGAC AGCCACTCCC ACGCAATTTT CGGCGGACTG
GAAATGGTCT CGGCCAACAT GGAAGACGAG GTGGTCGGTC TGGATGAACT GGAAAAACGC
CTGCGCGGCT GGCGTGACGA CGGCAAGGCC CGGCATGGCG ATGTGTTGAG CGTGGCCGGC
ATGAGTTCGG CGTATTGGGC CAAGGCTGAA GCGCTGGGCA AAATCTTCAA TAACGGCGAA
TGGACCGACG TGCCGGTGGT GTTCACCGGC AGCGATCACC ACACGGCGTG GGCCAACAAC
GTGATGCTCA AGCGTGCGGG CATCGACGCC GCGCTGCTGA AAACCCTGCC GGACGCGGAA
AAAGACACCC TCGGCAAACT GGCCAACGGT GAACCGAACG GCTTTGTGGT CGACGCCGGT
TGGGATCGGG TTGCCTCGAA AATGCCAGTG CCGAGCCCGG CCGACATGCT CAAAGCCGCG
CAATCGGCGG TGCGTTTCAA CAACAGCCTC GGCATCACCG CGTGGATGGA CCCCGCCGCC
AACGCCGCGC CGGGCGAGCC GGTGTTCGCC CTCAAGCCCA CCGAGAAAAC CGTCGGCGTG
CTGCCGGCCT ACAAGGCCCT GTCGGAAAGC GGCGGCATGA CTGCCCACGT CGCCGCACTG
CTGGTGGCCA ATCCGAAAAG CGTCCCGGCC GATCTCGACA CCCTCGACAA GGTGCGCCGG
CAGTTTCAGG GCATTCCCAA CCTCACGCTG CCGGGGATCA AGATCTTCGC CGACGGCGTG
ATCGAGTACC CGGCCCAGAG CGCGGCGATG ATCGATCCCT ACAGCAACTC GCACAAACAG
GGCGAATTGC TGATCGATCC GCAGCATTTC GGCGAACTGG TCAGTGCCAT CGACCAGCGC
GGCTGGCTGG TGCACATCCA CGCCATCGGC GACCGCGCGG TGCGCGAATC GCTGAACGGC
ATAGCCCAGG CGCGCAAGGA CCGGCAAAGC GGCGTAACGC ACTCGATCAC CCACCTGCAA
ATGGTCAACC CGAAGGAGTT CGCCCGCTTC AAGCCGCTGA ACGTGATTGC CTCGATGCAA
CTGCTGTGGG CCAGCGCCGA CGACTACACC ACCGACATGA TCAAGCCTTA CGTCAGCGCT
CTTGCCTTTC GCTATCAATA CCCGGCGCAT TCGCTGCTCA AACAGGGCGC GACGATTGCC
GGCGCGAGCG ACTGGCCGGT GTCCTCGCCG AACCCGTGGA ACGCCATGGC CCAGGCCATC
ACCCGCACCG GGCCGCTGGG CGTGCTCAAC GCCGACGAAC GCCTGGACCG TGAAACCATG
TTCTACGCCT ACACCGCCAA CGCGGCGCGG ACCATCGGCC TGGAACAACA GATTGGCTCG
CTGAGCCCCG GCAAACAGGC CGATTTCATC GTGCTCGATC GCGACGTGTT CAGCGTCGAT
GACAAAGCCC TGCATGACAC CCAGGTGCTG CAAACCTGGT TCGCCGGCCG TCAGGTCTAC
GCCCCTACCC TCCAATAA
 
Protein sequence
MKRFIPLFTK NLLIAAMSFA SMEAMAATDL VLFNGKIFTA DRAQPKVQAL AVENGKVLKV 
GSDAQIKALI EPGTQVIDLK GQALMPGLID SHSHAIFGGL EMVSANMEDE VVGLDELEKR
LRGWRDDGKA RHGDVLSVAG MSSAYWAKAE ALGKIFNNGE WTDVPVVFTG SDHHTAWANN
VMLKRAGIDA ALLKTLPDAE KDTLGKLANG EPNGFVVDAG WDRVASKMPV PSPADMLKAA
QSAVRFNNSL GITAWMDPAA NAAPGEPVFA LKPTEKTVGV LPAYKALSES GGMTAHVAAL
LVANPKSVPA DLDTLDKVRR QFQGIPNLTL PGIKIFADGV IEYPAQSAAM IDPYSNSHKQ
GELLIDPQHF GELVSAIDQR GWLVHIHAIG DRAVRESLNG IAQARKDRQS GVTHSITHLQ
MVNPKEFARF KPLNVIASMQ LLWASADDYT TDMIKPYVSA LAFRYQYPAH SLLKQGATIA
GASDWPVSSP NPWNAMAQAI TRTGPLGVLN ADERLDRETM FYAYTANAAR TIGLEQQIGS
LSPGKQADFI VLDRDVFSVD DKALHDTQVL QTWFAGRQVY APTLQ