Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3154 |
Symbol | |
ID | 3712879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3621772 |
End bp | 3623529 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | amidohydrolase-like |
Protein accession | YP_348883 |
Protein GI | 77459376 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAT TCATCCCGCT TTTCACAAAA AATCTGCTGA TCGCCGCTAT GAGTTTTGCC TCGATGGAAG CCATGGCCGC CACCGATCTG GTGCTGTTCA ATGGCAAGAT TTTCACCGCC GACCGCGCTC AACCGAAGGT TCAGGCGCTG GCCGTGGAGA ACGGCAAGGT GCTGAAAGTC GGCAGCGATG CGCAGATCAA GGCCTTGATC GAACCCGGCA CCCAGGTCAT CGACCTGAAA GGCCAGGCGC TGATGCCCGG CCTGATCGAC AGCCACTCCC ACGCAATTTT CGGCGGACTG GAAATGGTCT CGGCCAACAT GGAAGACGAG GTGGTCGGTC TGGATGAACT GGAAAAACGC CTGCGCGGCT GGCGTGACGA CGGCAAGGCC CGGCATGGCG ATGTGTTGAG CGTGGCCGGC ATGAGTTCGG CGTATTGGGC CAAGGCTGAA GCGCTGGGCA AAATCTTCAA TAACGGCGAA TGGACCGACG TGCCGGTGGT GTTCACCGGC AGCGATCACC ACACGGCGTG GGCCAACAAC GTGATGCTCA AGCGTGCGGG CATCGACGCC GCGCTGCTGA AAACCCTGCC GGACGCGGAA AAAGACACCC TCGGCAAACT GGCCAACGGT GAACCGAACG GCTTTGTGGT CGACGCCGGT TGGGATCGGG TTGCCTCGAA AATGCCAGTG CCGAGCCCGG CCGACATGCT CAAAGCCGCG CAATCGGCGG TGCGTTTCAA CAACAGCCTC GGCATCACCG CGTGGATGGA CCCCGCCGCC AACGCCGCGC CGGGCGAGCC GGTGTTCGCC CTCAAGCCCA CCGAGAAAAC CGTCGGCGTG CTGCCGGCCT ACAAGGCCCT GTCGGAAAGC GGCGGCATGA CTGCCCACGT CGCCGCACTG CTGGTGGCCA ATCCGAAAAG CGTCCCGGCC GATCTCGACA CCCTCGACAA GGTGCGCCGG CAGTTTCAGG GCATTCCCAA CCTCACGCTG CCGGGGATCA AGATCTTCGC CGACGGCGTG ATCGAGTACC CGGCCCAGAG CGCGGCGATG ATCGATCCCT ACAGCAACTC GCACAAACAG GGCGAATTGC TGATCGATCC GCAGCATTTC GGCGAACTGG TCAGTGCCAT CGACCAGCGC GGCTGGCTGG TGCACATCCA CGCCATCGGC GACCGCGCGG TGCGCGAATC GCTGAACGGC ATAGCCCAGG CGCGCAAGGA CCGGCAAAGC GGCGTAACGC ACTCGATCAC CCACCTGCAA ATGGTCAACC CGAAGGAGTT CGCCCGCTTC AAGCCGCTGA ACGTGATTGC CTCGATGCAA CTGCTGTGGG CCAGCGCCGA CGACTACACC ACCGACATGA TCAAGCCTTA CGTCAGCGCT CTTGCCTTTC GCTATCAATA CCCGGCGCAT TCGCTGCTCA AACAGGGCGC GACGATTGCC GGCGCGAGCG ACTGGCCGGT GTCCTCGCCG AACCCGTGGA ACGCCATGGC CCAGGCCATC ACCCGCACCG GGCCGCTGGG CGTGCTCAAC GCCGACGAAC GCCTGGACCG TGAAACCATG TTCTACGCCT ACACCGCCAA CGCGGCGCGG ACCATCGGCC TGGAACAACA GATTGGCTCG CTGAGCCCCG GCAAACAGGC CGATTTCATC GTGCTCGATC GCGACGTGTT CAGCGTCGAT GACAAAGCCC TGCATGACAC CCAGGTGCTG CAAACCTGGT TCGCCGGCCG TCAGGTCTAC GCCCCTACCC TCCAATAA
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Protein sequence | MKRFIPLFTK NLLIAAMSFA SMEAMAATDL VLFNGKIFTA DRAQPKVQAL AVENGKVLKV GSDAQIKALI EPGTQVIDLK GQALMPGLID SHSHAIFGGL EMVSANMEDE VVGLDELEKR LRGWRDDGKA RHGDVLSVAG MSSAYWAKAE ALGKIFNNGE WTDVPVVFTG SDHHTAWANN VMLKRAGIDA ALLKTLPDAE KDTLGKLANG EPNGFVVDAG WDRVASKMPV PSPADMLKAA QSAVRFNNSL GITAWMDPAA NAAPGEPVFA LKPTEKTVGV LPAYKALSES GGMTAHVAAL LVANPKSVPA DLDTLDKVRR QFQGIPNLTL PGIKIFADGV IEYPAQSAAM IDPYSNSHKQ GELLIDPQHF GELVSAIDQR GWLVHIHAIG DRAVRESLNG IAQARKDRQS GVTHSITHLQ MVNPKEFARF KPLNVIASMQ LLWASADDYT TDMIKPYVSA LAFRYQYPAH SLLKQGATIA GASDWPVSSP NPWNAMAQAI TRTGPLGVLN ADERLDRETM FYAYTANAAR TIGLEQQIGS LSPGKQADFI VLDRDVFSVD DKALHDTQVL QTWFAGRQVY APTLQ
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