Gene Pfl01_3090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3090 
Symbol 
ID3712777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3539222 
End bp3539884 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content60% 
IMG OID 
Productamino acid ABC transporter permease 
Protein accessionYP_348819 
Protein GI77459312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCAAT CCCCCAGTTG GTTGCATGAG TTGTGGATTG CCCGCGAAGC CTTGTGGCAA 
GGGTTTCTGA CCAGTGTGCA GGTGTCGGCG CTGGCCATTT TGTTCGGGAC GGTCATCGGC
GTATTTGCCG GGCTGGTGCT GACCTACGGC AAGTTCTGGA TGCGCGCACC GTTCCGCTTT
TATGTCGACC TGATTCGCGG TACGCCGGTG TTCGTGCTGG TGTTGGCGTG CTTCTACATG
GCTCCGGCGC TTGGTTGGCA GATCAGCGCA TTTCAGGCCG GCGCATTGGG TCTGACGCTG
TTTTGCGGCT CCCACGTGGC CGAAATCGTG CGCGGCGCGT TGCAGGCGTT GCCACGCGGG
CAGATGGAAG CCGGCAAGGC CATCGGCCTG ACGTTCTATC AGTCCCTCGG CTACGTGCTG
TTGCCTCAGG CGCTGCGGCA GATCCTGCCG ACCTGGGTCA ACTCGTCCAC GGAAATCGTC
AAGGCCTCGA CCTTGCTGTC GGTGATCGGC GTGGCCGAGC TGTTGCTCAG CACCCAGCAA
ATCATCGCCC GGACGTTCAT GACCCTGGAG TTTTACCTGT TCGCCGGTTT TCTGTTCTTC
GTCATCAACT ACGGCATCGA ATTACTCGGC CGGCACATTG AAAAGCGGGT GGCCCTGCCA
TGA
 
Protein sequence
MYQSPSWLHE LWIAREALWQ GFLTSVQVSA LAILFGTVIG VFAGLVLTYG KFWMRAPFRF 
YVDLIRGTPV FVLVLACFYM APALGWQISA FQAGALGLTL FCGSHVAEIV RGALQALPRG
QMEAGKAIGL TFYQSLGYVL LPQALRQILP TWVNSSTEIV KASTLLSVIG VAELLLSTQQ
IIARTFMTLE FYLFAGFLFF VINYGIELLG RHIEKRVALP