Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3090 |
Symbol | |
ID | 3712777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3539222 |
End bp | 3539884 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | amino acid ABC transporter permease |
Protein accession | YP_348819 |
Protein GI | 77459312 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCAAT CCCCCAGTTG GTTGCATGAG TTGTGGATTG CCCGCGAAGC CTTGTGGCAA GGGTTTCTGA CCAGTGTGCA GGTGTCGGCG CTGGCCATTT TGTTCGGGAC GGTCATCGGC GTATTTGCCG GGCTGGTGCT GACCTACGGC AAGTTCTGGA TGCGCGCACC GTTCCGCTTT TATGTCGACC TGATTCGCGG TACGCCGGTG TTCGTGCTGG TGTTGGCGTG CTTCTACATG GCTCCGGCGC TTGGTTGGCA GATCAGCGCA TTTCAGGCCG GCGCATTGGG TCTGACGCTG TTTTGCGGCT CCCACGTGGC CGAAATCGTG CGCGGCGCGT TGCAGGCGTT GCCACGCGGG CAGATGGAAG CCGGCAAGGC CATCGGCCTG ACGTTCTATC AGTCCCTCGG CTACGTGCTG TTGCCTCAGG CGCTGCGGCA GATCCTGCCG ACCTGGGTCA ACTCGTCCAC GGAAATCGTC AAGGCCTCGA CCTTGCTGTC GGTGATCGGC GTGGCCGAGC TGTTGCTCAG CACCCAGCAA ATCATCGCCC GGACGTTCAT GACCCTGGAG TTTTACCTGT TCGCCGGTTT TCTGTTCTTC GTCATCAACT ACGGCATCGA ATTACTCGGC CGGCACATTG AAAAGCGGGT GGCCCTGCCA TGA
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Protein sequence | MYQSPSWLHE LWIAREALWQ GFLTSVQVSA LAILFGTVIG VFAGLVLTYG KFWMRAPFRF YVDLIRGTPV FVLVLACFYM APALGWQISA FQAGALGLTL FCGSHVAEIV RGALQALPRG QMEAGKAIGL TFYQSLGYVL LPQALRQILP TWVNSSTEIV KASTLLSVIG VAELLLSTQQ IIARTFMTLE FYLFAGFLFF VINYGIELLG RHIEKRVALP
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