Gene Pfl01_3083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3083 
Symbol 
ID3712770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3531893 
End bp3534430 
Gene Length2538 bp 
Protein Length845 aa 
Translation table11 
GC content62% 
IMG OID 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_348812 
Protein GI77459305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG TACCGAACAC CAACGACGCC CAGACATTGA TCGCCCGAAC CGACTGGAGC 
CGCAGCCCGC TGGGCGCCGC CGGCACCTGG CCTCAGAGCC TGCGCACCGC GGTGGACATC
GTGCTTCACT CGCCGATGCC GATGCTGCTG TTGTGGGGCC CGCAATTGAC CCAGATCTAC
AACGACGGCT TCGCGCTGCT GGCCGGCAAC AAGCATCCGC ACGCTTTCGG ACAACCAGCG
CACCAGATAT GGCCGGAACT TCGAGACTTT ACCGACCCTA TTTACAGCGC CGTCCTACAG
GGCCAGGTGC GAACCTACAG CGAACGACGC TTCACCCTGC AACGGGACGG CCAGGAGTCC
GACTTCTGGC TTGACCTGAC CTACAGCCCG ATCCGTGACG AAAGCGCGCA GGTGGCCGGA
ATTTTGGTCA CCGCCATCGA AACCAACGAA CGTCGGCGCA TTGCCCTGGA ACTGCAACAG
CGCTCCGAAA ACAGCCTCAA GGCCCAGCGC GAAAGCGAAG AGCGCCTGCA ACTGGCGCTG
GCAGCCACCG ATGCGGTCGG CACCTGGGAT TGGGACATCG GCGAAGACCG CTTCATTGCC
GACGCGCATT TCGCCCAGTT GCACGGTGTC GATCCGGCGC TGGCCGGTCA GTTGCCGATC
AGCGAGTATC TGCACGGCGT GCACCCCGAA GACCGCGCAA TGATCGCCCG CAGTATCAAG
CATTGCATTA CCCACGGCAC CGAATACGCC GAGGAATACC GCCTGCTGCA GGCCAACGGC
GAACTGCGCT GGGTGTTCGC CCGCGGGCGT TGCTACAAGG ATCATCATGG TCGGCCGACG
CGCTTTCTCG GCGCTGCGCT GGATCTGACC GAACGCAAGC ACACCGAACA GGCATTGCGG
CAAAGTCAGA CCGAGCTGCA ACTGATCATC AACGCCATGC CGATCCTGAT CAGTTATGTC
GACCACGAGG AACGCTTTCG CCTGAACAAC GCCGCGTACC TCGACTGGTA CGGGCTCACG
CCGCAGGAGC TGTACGGTCG CACGATCCGC GAGGTGATCG GCGAAGAGGC CTATTTCCTG
CGGGCACCTT ACATCGCCGA AGCACTCGCC GGTCGCCCCT GCTCGTTCAG CCTGTACACG
CCGCACCGCG ACGGCAGCCA GCGGCATGCC TTGATGAATT ACCTGCCGCG CCACGGTGCG
GACGGTGCAG TGAACGGTTT CTACATCTTC GTGATCGACG AAACCGAACG CAAAAAGACC
GAAGAAGCCC TGCGCAACCT CAATGAAACC CTTGAGGAGC GTGTGAGTGC GCGCACCGAA
CAACTGGCCC AGGCCAACCA GCGTTTGCAG AACGAAATGT TCGAACGCGA GCGCGCCGAA
GACGCTCTGC GTCACGCACA GAAAATGGAA GCGGTCGGCC AGCTCACCGG CGGCATCGCC
CACGACTTCA ACAACATGCT GACCGGCATC ATCGGCAGCC TCGACCTGAT GCAACGCTAC
ATCGCCAGTG GCCGCGCCGA TGAGATCGGC CGTTTCACCG ACGCGGCGGT GTCTTCGGCC
AACCGCGCGG CGGCATTGAC CCACCGTCTG CTGGCGTTCT CCCGGCGTCA GTCGCTGGAT
CGCAAGACTA TCGACGTCAA TGAACTGATC CACTCGCTGG AAGACCTGAT CCGCCGCACT
AAAGGTGATC CGATCGAGCT CAAGTTGCGC CTGGCCGACA ATGTATGGCC GGTCAGCACC
GATGTCAGCC AACTGGAAAA CGCCCTGCTC AACCTGGTGA TCAACGCCCG CGATGCCATG
CCGGACGGCG GTGAACTACT GATCGAAACG GCCAACGTCT ACCTCGACGG CAACGACATC
ACTACCCTCG AACCGGTCAA GGCCGGTGAT TACCTGATGC TGGCGGTGAG CGACAACGGC
ACCGGCATGA CGCCTTCAGT ACGTTCCAAA GCGTTCGATC CGTTCTTTAC GACCAAACCC
ATCGGGCAAG GCACCGGGCT CGGCTTGTCG ATGATTTATG GCTTTGCCCA GCAATCGGGA
GGGCACGTCA GCCTCGACAG CCTGCCGGGC CAGGGCACCT GCGTGCGCCT GTACTTGCCG
CGTTTGTATG CACTGGAAGC GGAGCAGCCG GCAATCGAAG CGGTTGCCGA GGCTCCGGCT
GTCGCCACTG GCGAAACCGT GGTGGTGGTC GAGGACGATC CGGCAGTGCG CATGCTGGTC
ATGGACCTGC TCAAGGAGCT GGGTTATCGC GCCCATGAGG CCGAAGACGC CAAGGGTGCC
TTGCCGCTAC TGGAATCCGA CCTGCGGGTG GACTTGCTGG TGACCGACGT CGGCCTGCCG
GGCATGAACG GCCGGCAAAT GGCGGAGATC GCCCGCCAAC ATCGTCCGGG GCTCAAAGTG
TTGTTCATGA CCGGGTACGC GCAGAAAGCC GCCGAACGTC AGGGCTTCCT CGAGGACGGG
ATGGACATGG TCGCCAAGCC GTTTTCCATC GAACAACTGG CCGGCAAGAT CCGCACGATG
ATCAGCCAAA ACCCGTGA
 
Protein sequence
MNAVPNTNDA QTLIARTDWS RSPLGAAGTW PQSLRTAVDI VLHSPMPMLL LWGPQLTQIY 
NDGFALLAGN KHPHAFGQPA HQIWPELRDF TDPIYSAVLQ GQVRTYSERR FTLQRDGQES
DFWLDLTYSP IRDESAQVAG ILVTAIETNE RRRIALELQQ RSENSLKAQR ESEERLQLAL
AATDAVGTWD WDIGEDRFIA DAHFAQLHGV DPALAGQLPI SEYLHGVHPE DRAMIARSIK
HCITHGTEYA EEYRLLQANG ELRWVFARGR CYKDHHGRPT RFLGAALDLT ERKHTEQALR
QSQTELQLII NAMPILISYV DHEERFRLNN AAYLDWYGLT PQELYGRTIR EVIGEEAYFL
RAPYIAEALA GRPCSFSLYT PHRDGSQRHA LMNYLPRHGA DGAVNGFYIF VIDETERKKT
EEALRNLNET LEERVSARTE QLAQANQRLQ NEMFERERAE DALRHAQKME AVGQLTGGIA
HDFNNMLTGI IGSLDLMQRY IASGRADEIG RFTDAAVSSA NRAAALTHRL LAFSRRQSLD
RKTIDVNELI HSLEDLIRRT KGDPIELKLR LADNVWPVST DVSQLENALL NLVINARDAM
PDGGELLIET ANVYLDGNDI TTLEPVKAGD YLMLAVSDNG TGMTPSVRSK AFDPFFTTKP
IGQGTGLGLS MIYGFAQQSG GHVSLDSLPG QGTCVRLYLP RLYALEAEQP AIEAVAEAPA
VATGETVVVV EDDPAVRMLV MDLLKELGYR AHEAEDAKGA LPLLESDLRV DLLVTDVGLP
GMNGRQMAEI ARQHRPGLKV LFMTGYAQKA AERQGFLEDG MDMVAKPFSI EQLAGKIRTM
ISQNP