Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3083 |
Symbol | |
ID | 3712770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3531893 |
End bp | 3534430 |
Gene Length | 2538 bp |
Protein Length | 845 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_348812 |
Protein GI | 77459305 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCTG TACCGAACAC CAACGACGCC CAGACATTGA TCGCCCGAAC CGACTGGAGC CGCAGCCCGC TGGGCGCCGC CGGCACCTGG CCTCAGAGCC TGCGCACCGC GGTGGACATC GTGCTTCACT CGCCGATGCC GATGCTGCTG TTGTGGGGCC CGCAATTGAC CCAGATCTAC AACGACGGCT TCGCGCTGCT GGCCGGCAAC AAGCATCCGC ACGCTTTCGG ACAACCAGCG CACCAGATAT GGCCGGAACT TCGAGACTTT ACCGACCCTA TTTACAGCGC CGTCCTACAG GGCCAGGTGC GAACCTACAG CGAACGACGC TTCACCCTGC AACGGGACGG CCAGGAGTCC GACTTCTGGC TTGACCTGAC CTACAGCCCG ATCCGTGACG AAAGCGCGCA GGTGGCCGGA ATTTTGGTCA CCGCCATCGA AACCAACGAA CGTCGGCGCA TTGCCCTGGA ACTGCAACAG CGCTCCGAAA ACAGCCTCAA GGCCCAGCGC GAAAGCGAAG AGCGCCTGCA ACTGGCGCTG GCAGCCACCG ATGCGGTCGG CACCTGGGAT TGGGACATCG GCGAAGACCG CTTCATTGCC GACGCGCATT TCGCCCAGTT GCACGGTGTC GATCCGGCGC TGGCCGGTCA GTTGCCGATC AGCGAGTATC TGCACGGCGT GCACCCCGAA GACCGCGCAA TGATCGCCCG CAGTATCAAG CATTGCATTA CCCACGGCAC CGAATACGCC GAGGAATACC GCCTGCTGCA GGCCAACGGC GAACTGCGCT GGGTGTTCGC CCGCGGGCGT TGCTACAAGG ATCATCATGG TCGGCCGACG CGCTTTCTCG GCGCTGCGCT GGATCTGACC GAACGCAAGC ACACCGAACA GGCATTGCGG CAAAGTCAGA CCGAGCTGCA ACTGATCATC AACGCCATGC CGATCCTGAT CAGTTATGTC GACCACGAGG AACGCTTTCG CCTGAACAAC GCCGCGTACC TCGACTGGTA CGGGCTCACG CCGCAGGAGC TGTACGGTCG CACGATCCGC GAGGTGATCG GCGAAGAGGC CTATTTCCTG CGGGCACCTT ACATCGCCGA AGCACTCGCC GGTCGCCCCT GCTCGTTCAG CCTGTACACG CCGCACCGCG ACGGCAGCCA GCGGCATGCC TTGATGAATT ACCTGCCGCG CCACGGTGCG GACGGTGCAG TGAACGGTTT CTACATCTTC GTGATCGACG AAACCGAACG CAAAAAGACC GAAGAAGCCC TGCGCAACCT CAATGAAACC CTTGAGGAGC GTGTGAGTGC GCGCACCGAA CAACTGGCCC AGGCCAACCA GCGTTTGCAG AACGAAATGT TCGAACGCGA GCGCGCCGAA GACGCTCTGC GTCACGCACA GAAAATGGAA GCGGTCGGCC AGCTCACCGG CGGCATCGCC CACGACTTCA ACAACATGCT GACCGGCATC ATCGGCAGCC TCGACCTGAT GCAACGCTAC ATCGCCAGTG GCCGCGCCGA TGAGATCGGC CGTTTCACCG ACGCGGCGGT GTCTTCGGCC AACCGCGCGG CGGCATTGAC CCACCGTCTG CTGGCGTTCT CCCGGCGTCA GTCGCTGGAT CGCAAGACTA TCGACGTCAA TGAACTGATC CACTCGCTGG AAGACCTGAT CCGCCGCACT AAAGGTGATC CGATCGAGCT CAAGTTGCGC CTGGCCGACA ATGTATGGCC GGTCAGCACC GATGTCAGCC AACTGGAAAA CGCCCTGCTC AACCTGGTGA TCAACGCCCG CGATGCCATG CCGGACGGCG GTGAACTACT GATCGAAACG GCCAACGTCT ACCTCGACGG CAACGACATC ACTACCCTCG AACCGGTCAA GGCCGGTGAT TACCTGATGC TGGCGGTGAG CGACAACGGC ACCGGCATGA CGCCTTCAGT ACGTTCCAAA GCGTTCGATC CGTTCTTTAC GACCAAACCC ATCGGGCAAG GCACCGGGCT CGGCTTGTCG ATGATTTATG GCTTTGCCCA GCAATCGGGA GGGCACGTCA GCCTCGACAG CCTGCCGGGC CAGGGCACCT GCGTGCGCCT GTACTTGCCG CGTTTGTATG CACTGGAAGC GGAGCAGCCG GCAATCGAAG CGGTTGCCGA GGCTCCGGCT GTCGCCACTG GCGAAACCGT GGTGGTGGTC GAGGACGATC CGGCAGTGCG CATGCTGGTC ATGGACCTGC TCAAGGAGCT GGGTTATCGC GCCCATGAGG CCGAAGACGC CAAGGGTGCC TTGCCGCTAC TGGAATCCGA CCTGCGGGTG GACTTGCTGG TGACCGACGT CGGCCTGCCG GGCATGAACG GCCGGCAAAT GGCGGAGATC GCCCGCCAAC ATCGTCCGGG GCTCAAAGTG TTGTTCATGA CCGGGTACGC GCAGAAAGCC GCCGAACGTC AGGGCTTCCT CGAGGACGGG ATGGACATGG TCGCCAAGCC GTTTTCCATC GAACAACTGG CCGGCAAGAT CCGCACGATG ATCAGCCAAA ACCCGTGA
|
Protein sequence | MNAVPNTNDA QTLIARTDWS RSPLGAAGTW PQSLRTAVDI VLHSPMPMLL LWGPQLTQIY NDGFALLAGN KHPHAFGQPA HQIWPELRDF TDPIYSAVLQ GQVRTYSERR FTLQRDGQES DFWLDLTYSP IRDESAQVAG ILVTAIETNE RRRIALELQQ RSENSLKAQR ESEERLQLAL AATDAVGTWD WDIGEDRFIA DAHFAQLHGV DPALAGQLPI SEYLHGVHPE DRAMIARSIK HCITHGTEYA EEYRLLQANG ELRWVFARGR CYKDHHGRPT RFLGAALDLT ERKHTEQALR QSQTELQLII NAMPILISYV DHEERFRLNN AAYLDWYGLT PQELYGRTIR EVIGEEAYFL RAPYIAEALA GRPCSFSLYT PHRDGSQRHA LMNYLPRHGA DGAVNGFYIF VIDETERKKT EEALRNLNET LEERVSARTE QLAQANQRLQ NEMFERERAE DALRHAQKME AVGQLTGGIA HDFNNMLTGI IGSLDLMQRY IASGRADEIG RFTDAAVSSA NRAAALTHRL LAFSRRQSLD RKTIDVNELI HSLEDLIRRT KGDPIELKLR LADNVWPVST DVSQLENALL NLVINARDAM PDGGELLIET ANVYLDGNDI TTLEPVKAGD YLMLAVSDNG TGMTPSVRSK AFDPFFTTKP IGQGTGLGLS MIYGFAQQSG GHVSLDSLPG QGTCVRLYLP RLYALEAEQP AIEAVAEAPA VATGETVVVV EDDPAVRMLV MDLLKELGYR AHEAEDAKGA LPLLESDLRV DLLVTDVGLP GMNGRQMAEI ARQHRPGLKV LFMTGYAQKA AERQGFLEDG MDMVAKPFSI EQLAGKIRTM ISQNP
|
| |